Publications by authors named "Jie-Fu Chen"

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Clinical Outcomes, Genomic Heterogeneity, and Therapeutic Considerations Across Histologic Subtypes of Urothelial Carcinoma.
Carissa E Chu, Ziyu Chen, Karissa Whiting, Irina Ostrovnaya, Andrew T Lenis, Jie-Fu Chen, Ying-Bei Chen

Eur Urol· November 2025

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Comprehensive Molecular, Pathological, and Clinical Characterization of Clear Cell Adenocarcinoma of the Urinary Tract.
Rayan Rammal, Florestan J Koll, Ziyu Chen, Jacob E Tallman, Syed Muneeb Alam, Jie-Fu Chen, Ying-Bei Chen

Mod Pathol· October 2025

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Author Correction: Meta-prediction of coronary artery disease risk.
Shang-Fu Chen, Sang Eun Lee, Hossein Javedani Sadaei, Jun-Bean Park, Ahmed Khattab, Jie-Fu Chen

Nat Med· September 2025

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Integrated histopathologic modeling of detailed tumor subtypes and actionable biomarkers.
Kevin M Boehm, Madison Darmofal, Arfath Pasha, Andrew Aukerman, Raymond Lim, Jie-Fu Chen

bioRxiv· August 2025

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Meta-prediction of coronary artery disease risk.
Shang-Fu Chen, Sang Eun Lee, Hossein Javedani Sadaei, Jun-Bean Park, Ahmed Khattab, Jie-Fu Chen

Nat Med· July 2025

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Emerin Dysregulation Drives the Very-Small-Nuclear Phenotype and Lineage Plasticity That Associate with a Clinically Aggressive Subtype of Prostate Cancer.
Le Zhang, Pai-Chi Teng, Karen A Cavassani, Jasmine Wang, Catherine Grasso, Zijing Chen, Jie-Fu Chen

Clin Cancer Res· May 2025

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Molecular Heterogeneity and Immune Infiltration Drive Clinical Outcomes in Upper Tract Urothelial Carcinoma.
Kwanghee Kim, Syed M Alam, Fengshen Kuo, Ziyu Chen, Wesley Yip, Jie-Fu Chen

Eur Urol· March 2025

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Molecular Classification of Urothelial Carcinoma.
Jie-Fu Chen, Hikmat Al-Ahmadie

Surg Pathol Clin· March 2025

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B7-H3-liquid biopsy for the characterization and monitoring of the dynamic biology of prostate cancer.
Yong Ju, Joshua Watson, Jasmine J Wang, Ying-Tzu Yen, Lilit Gevorkian, Zijing Chen, Chen Zhao, Jie-Fu Chen

Drug Resist Updat· March 2025

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Histopathologic and Molecular Characterization of IDH-Mutant Prostatic Adenocarcinoma.
Benzion Samueli, Hikmat Al-Ahmadie, Ying-Bei Chen, Anuradha Gopalan, Judy Sarungbam, Jie-Fu Chen

Mod Pathol· January 2025

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MSH6-proficient crypt foci in MSH6 constitutional mismatch repair deficiency: reversion of a frameshifted coding microsatellite to its wild-type sequence.
Jinru Shia, Francisco Sanchez-Vega, Stanley Cho, Jie-Fu Chen, Chin-Tung Chen

Fam Cancer· November 2024

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Immune checkpoint markers and tumour mutation burden in Wilms tumour: a study of 59 cases.
Aidas J Mattis, Jie-Fu Chen, Ivan A Gonzalez, Rehan Rais, Louis P Dehner

Pathology· October 2024

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A Comprehensive Clinicopathologic and Molecular Reappraisal of GLI1 -altered Mesenchymal Tumors with Pooled Outcome Analysis Showing Poor Survival in GLI1 - amplified Versus GLI1- rearranged Tumors.
Carla Saoud, Abbas Agaimy, Josephine K Dermawan, Jie-Fu Chen, Marc K Rosenblum

Am J Surg Pathol· October 2024

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Differential NEUROD1, ASCL1, and POU2F3 Expression Defines Molecular Subsets of Bladder Small Cell/Neuroendocrine Carcinoma With Prognostic Implications.
Dilara Akbulut, Karissa Whiting, Min-Yuen Teo, Jacob E Tallman, Gamze Gokturk Ozcan, Jie-Fu Chen, Ying-Bei Chen

Mod Pathol· October 2024

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Pathologic complete response to KEYNOTE522 and HER2-directed therapy for synchronous TNBC and HER2+ breast cancer.
Nicholas Mai, Jie-Fu Chen, Satshil Rana, Mark Robson, Sarat Chandarlapaty

NPJ Precis Oncol· July 2024

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Deep-Learning Model for Tumor-Type Prediction Using Targeted Clinical Genomic Sequencing Data.
Madison Darmofal, Shalabh Suman, Gurnit Atwal, Michael Toomey, Jie-Fu Chen

Cancer Discov· June 2024

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L1 Cell Adhesion Molecule (L1CAM) Expression and Molecular Alterations Distinguish Low-Grade Oncocytic Tumor From Eosinophilic Chromophobe Renal Cell Carcinoma.
Mohammed Alghamdi, Jie-Fu Chen, Achim Jungbluth, Sirma Koutzaki, Matthew B Palmer, Ying-Bei Chen

Mod Pathol· May 2024

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Deep Learning Model for Tumor Type Prediction using Targeted Clinical Genomic Sequencing Data.
Madison Darmofal, Shalabh Suman, Gurnit Atwal, Jie-Fu Chen, Jason C Chang

medRxiv· September 2023

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Prostate cancer extracellular vesicle digital scoring assay - a rapid noninvasive approach for quantification of disease-relevant mRNAs.
Jasmine J Wang, Na Sun, Yi-Te Lee, Minhyung Kim, Tatyana Vagner, Zijing Chen, Jie-Fu Chen

Nano Today· February 2023

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Urothelial Carcinoma: Divergent Differentiation and Morphologic Subtypes.
Jatin Gandhi, Jie-Fu Chen, Hikmat Al-Ahmadie

Surg Pathol Clin· December 2022

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NUTM1-fusion positive malignant neoplasms of the genitourinary tract: A report of six cases highlighting involvement of unusual anatomic locations and histologic heterogeneity.
Bin Xu, Jie-Fu Chen, Judy Sarungbam, Satish Tickoo, Brendan C Dickson

Genes Chromosomes Cancer· September 2022

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Construction of a Nomogram Model for Predicting Pleural Effusion Secondary to Severe Acute Pancreatitis.
Bing-Mei Zhou, Zhao-Lei Qiu, Kai-Xuan Niu, Yin-E Wang, Fu-Chen Jie

Emerg Med Int· March 2022

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Loss of CDCP1 triggers FAK activation in detached prostate cancer cells.
Sara G Pollan, Pai-Chi Teng, Yu Jen Jan, Julie Livingstone, Cai Huang, Jie-Fu Chen

Am J Clin Exp Urol· August 2021

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Napsin A is a highly sensitive marker for nephrogenic adenoma: an immunohistochemical study with a specificity test in genitourinary tumors.
Nima Sharifai, Brooj Abro, Jie-Fu Chen, Ming Zhao, Huiying He

Hum Pathol· August 2020

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Expression of novel neuroendocrine marker insulinoma-associated protein 1 (INSM1) in genitourinary high-grade neuroendocrine carcinomas: An immunohistochemical study with specificity analysis and comparison to chromogranin, synaptophysin, and CD56.
Jie-Fu Chen, Chen Yang, Yue Sun, Dengfeng Cao

Pathol Res Pract· June 2020

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