Publications by authors named "Jingkai Yu"

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Fusing literature and full network data improves disease similarity computation.
Ping Li, Yaling Nie, Jingkai Yu

BMC Bioinformatics· August 2016

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An Effective Method to Identify Shared Pathways and Common Factors among Neurodegenerative Diseases.
Ping Li, Yaling Nie, Jingkai Yu

PLoS One· June 2016

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Revealing the role of oxidation state in interaction between nitro/amino-derived particulate matter and blood proteins.
Zhen Liu, Ping Li, Weiwei Bian, Jingkai Yu, Jinhua Zhan

Sci Rep· May 2016

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Structural and functional analysis of the loading acyltransferase from avermectin modular polyketide synthase.
Fen Wang, Yanjie Wang, Junjie Ji, Zhan Zhou, Jingkai Yu

ACS Chem Biol· April 2015

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Molecular insight into the steric shielding effect of PEG on the conjugated staphylokinase: biochemical characterization and molecular dynamics simulation.
Qimeng Mu, Tao Hu, Jingkai Yu

PLoS One· February 2014

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Mining breast cancer genes with a network based noise-tolerant approach.
Yaling Nie, Jingkai Yu

BMC Syst Biol· June 2013

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Phenyl linker-induced dense PEG conformation improves the efficacy of C-terminally monoPEGylated staphylokinase.
Xiaoying Xue, Dongxia Li, Jingkai Yu, Guanghui Ma, Zhiguo Su

Biomacromolecules· February 2013

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Assigning confidence scores to protein-protein interactions.
Jingkai Yu, Thilakam Murali, Russell L Finley

Methods Mol Biol· April 2012

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A protein network-guided screen for cell cycle regulators in Drosophila.
Stephen T Guest, Jingkai Yu, Dongmei Liu, Julie A Hines, Maria A Kashat

BMC Syst Biol· May 2011

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DroID 2011: a comprehensive, integrated resource for protein, transcription factor, RNA and gene interactions for Drosophila.
Thilakam Murali, Svetlana Pacifico, Jingkai Yu, Stephen Guest, George G Roberts

Nucleic Acids Res· January 2011

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Combining multiple positive training sets to generate confidence scores for protein-protein interactions.
Jingkai Yu, Russell L Finley

Bioinformatics· January 2009

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Cost-effective strategies for completing the interactome.
Ariel S Schwartz, Jingkai Yu, Kyle R Gardenour, Russell L Finley, Trey Ideker

Nat Methods· January 2009

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DroID: the Drosophila Interactions Database, a comprehensive resource for annotated gene and protein interactions.
Jingkai Yu, Svetlana Pacifico, Guozhen Liu, Russell L Finley

BMC Genomics· October 2008

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A proteome-wide protein interaction map for Campylobacter jejuni.
Jodi R Parrish, Jingkai Yu, Guozhen Liu, Julie A Hines, Jason E Chan

Genome Biol· February 2008

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Computational approaches for predicting protein-protein interactions: a survey.
Jingkai Yu, Farshad Fotouhi

J Med Syst· February 2006

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