Publications by authors named "Jiye Cheng"

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Gut microbiota from twins discordant for obesity modulate metabolism in mice.
Vanessa K Ridaura, Jeremiah J Faith, Federico E Rey, Jiye Cheng, Alexis E Duncan, Andrew L Kau, Nicholas W Griffin, Vincent Lombard, Bernard Henrissat, James R Bain

September 2013

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Using gnotobiotic mice to decipher effects of gut microbiome repair in undernourished children on tuft and goblet cell function.
Yi Wang, Hao-Wei Chang, Jiye Cheng, Daniel M Webber, Hannah M Lynn

Proc Natl Acad Sci U S A· December 2025

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Glycoside hydrolase-mediated glucomannan catabolism in , a target of microbiota-directed foods for malnourished children.
Cyrus Zhou, Matthew C Hibberd, Evan M Lee, Bo Pilgaard, Marlene Vuillemin, Jiye Cheng

Proc Natl Acad Sci U S A· December 2025

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Using gnotobiotic mice to decipher effects of gut microbiome repair in undernourished children on tuft and goblet cell function.
Yi Wang, Hao-Wei Chang, Jiye Cheng, Daniel M Webber, Hannah M Lynn

bioRxiv· October 2025

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Systematic evaluation of metatranscriptomic differential gene expression , , and enables elucidation of inter-species cross-feeding.
Evan M Lee, Nathan P McNulty, Jiye Cheng, Hao-Wei Chang, Matthew C Hibberd

bioRxiv· September 2025

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Effects of the gut microbiota on placental angiogenesis and intrauterine growth in gnotobiotic mice.
Reyan Coskun, ZeNan L Chang, Athziri Marcial Rodríguez, Haoxin Liu, Jiye Cheng

Proc Natl Acad Sci U S A· July 2025

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A human gut fatty acid amide hydrolase.
Jiye Cheng, Siddarth Venkatesh, Ke Ke, Michael J Barratt, Jeffrey I Gordon

Science· October 2024

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Deficiency of IL-22-binding protein enhances the ability of the gut microbiota to protect against enteric pathogens.
José L Fachi, Blanda Di Luccia, Susan Gilfillan, Hao-Wei Chang, Christina Song, Jiye Cheng

Proc Natl Acad Sci U S A· May 2024

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Prevotella copri and microbiota members mediate the beneficial effects of a therapeutic food for malnutrition.
Hao-Wei Chang, Evan M Lee, Yi Wang, Cyrus Zhou, Kali M Pruss, Jiye Cheng

Nat Microbiol· April 2024

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-related effects of a therapeutic food for malnutrition.
Hao-Wei Chang, Evan M Lee, Yi Wang, Cyrus Zhou, Kali M Pruss, Jiye Cheng

bioRxiv· December 2023

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ApoE isoform- and microbiota-dependent progression of neurodegeneration in a mouse model of tauopathy.
Dong-Oh Seo, David O'Donnell, Nimansha Jain, Jason D Ulrich, Jasmin Herz, Jiye Cheng

Science· January 2023

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Functional mining of novel terpene synthases from metagenomes.
Suryang Kwak, Nathan Crook, Aki Yoneda, Naomi Ahn, Jie Ning, Jiye Cheng

Biotechnol Biofuels Bioprod· October 2022

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Microbial liberation of N-methylserotonin from orange fiber in gnotobiotic mice and humans.
Nathan D Han, Jiye Cheng, Omar Delannoy-Bruno, Daniel Webber, Nicolas Terrapon

Cell· August 2022

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Microbial liberation of N-methylserotonin from orange fiber in gnotobiotic mice and humans.
Nathan D Han, Jiye Cheng, Omar Delannoy-Bruno, Daniel Webber, Nicolas Terrapon

Cell· July 2022

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An approach for evaluating the effects of dietary fiber polysaccharides on the human gut microbiome and plasma proteome.
Omar Delannoy-Bruno, Chandani Desai, Juan J Castillo, Garret Couture, Ruteja A Barve, Jiye Cheng

Proc Natl Acad Sci U S A· May 2022

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Evaluating microbiome-directed fibre snacks in gnotobiotic mice and humans.
Omar Delannoy-Bruno, Chandani Desai, Arjun S Raman, Robert Y Chen, Matthew C Hibberd, Jiye Cheng

Nature· July 2021

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Gut microbiome contributions to altered metabolism in a pig model of undernutrition.
Hao-Wei Chang, Nathan P McNulty, Matthew C Hibberd, David O'Donnell, Jiye Cheng

Proc Natl Acad Sci U S A· May 2021

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Combined Prebiotic and Microbial Intervention Improves Oral Cholera Vaccination Responses in a Mouse Model of Childhood Undernutrition.
Blanda Di Luccia, Philip P Ahern, Nicholas W Griffin, Jiye Cheng, Janaki L Guruge

Cell Host Microbe· June 2020

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Identifying determinants of bacterial fitness in a model of human gut microbial succession.
Lihui Feng, Arjun S Raman, Matthew C Hibberd, Jiye Cheng, Nicholas W Griffin

Proc Natl Acad Sci U S A· February 2020

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Long-Term Culture Captures Injury-Repair Cycles of Colonic Stem Cells.
Yi Wang, I-Ling Chiang, Takahiro E Ohara, Satoru Fujii, Jiye Cheng

Cell· November 2019

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Bioremediation of a Common Product of Food Processing by a Human Gut Bacterium.
Ashley R Wolf, Darryl A Wesener, Jiye Cheng, Alexandra N Houston-Ludlam, Zachary W Beller

Cell Host Microbe· October 2019

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Interspecies Competition Impacts Targeted Manipulation of Human Gut Bacteria by Fiber-Derived Glycans.
Michael L Patnode, Zachary W Beller, Nathan D Han, Jiye Cheng, Samantha L Peters

Cell· September 2019

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Effects of microbiota-directed foods in gnotobiotic animals and undernourished children.
Jeanette L Gehrig, Siddarth Venkatesh, Hao-Wei Chang, Matthew C Hibberd, Vanderlene L Kung, Jiye Cheng

Science· July 2019

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Mechanisms by which sialylated milk oligosaccharides impact bone biology in a gnotobiotic mouse model of infant undernutrition.
Carrie A Cowardin, Philip P Ahern, Vanderlene L Kung, Matthew C Hibberd, Jiye Cheng

Proc Natl Acad Sci U S A· June 2019

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Causal Genetic Variation Underlying Metabolome Differences.
Devjanee Swain-Lenz, Igor Nikolskiy, Jiye Cheng, Priya Sudarsanam, Darcy Nayler

Genetics· August 2017

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The effects of micronutrient deficiencies on bacterial species from the human gut microbiota.
Matthew C Hibberd, Meng Wu, Dmitry A Rodionov, Xiaoqing Li, Jiye Cheng

Sci Transl Med· May 2017

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