Publications by authors named "Jochen Supper"

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An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge.
Catherine A Brownstein, Alan H Beggs, Nils Homer, Barry Merriman, Timothy W Yu, Jochen Supper

Genome Biol· March 2014

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Detecting and visualizing gene fusions.
Jochen Supper, Claudia Gugenmus, Johannes Wollnik, Tanja Drueke, Matthias Scherf

Methods· January 2013

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TDP-43 regulates global translational yield by splicing of exon junction complex component SKAR.
Fabienne C Fiesel, Stephanie S Weber, Jochen Supper, Andreas Zell, Philipp J Kahle

Nucleic Acids Res· March 2012

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Predicting DNA-binding specificities of eukaryotic transcription factors.
Adrian Schröder, Johannes Eichner, Jochen Supper, Jonas Eichner, Dierk Wanke

PLoS One· November 2010

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Optimal selection of epitopes for TXP-immunoaffinity mass spectrometry.
Hannes Planatscher, Jochen Supper, Oliver Poetz, Dieter Stoll, Thomas Joos

Algorithms Mol Biol· June 2010

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BowTieBuilder: modeling signal transduction pathways.
Jochen Supper, Lucía Spangenberg, Hannes Planatscher, Andreas Dräger, Adrian Schröder

BMC Syst Biol· June 2009

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Modeling metabolic networks in C. glutamicum: a comparison of rate laws in combination with various parameter optimization strategies.
Andreas Dräger, Marcel Kronfeld, Michael J Ziller, Jochen Supper, Hannes Planatscher

BMC Syst Biol· January 2009

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SBMLsqueezer: a CellDesigner plug-in to generate kinetic rate equations for biochemical networks.
Andreas Dräger, Nadine Hassis, Jochen Supper, Adrian Schröder, Andreas Zell

BMC Syst Biol· April 2008

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EDISA: extracting biclusters from multiple time-series of gene expression profiles.
Jochen Supper, Martin Strauch, Dierk Wanke, Klaus Harter, Andreas Zell

BMC Bioinformatics· September 2007

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