Publications by authors named "Joel D Allen"

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Site-specific glycan analysis of the SARS-CoV-2 spike.
Yasunori Watanabe, Joel D Allen, Daniel Wrapp, Jason S McLellan, Max Crispin

July 2020

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Vulnerabilities in coronavirus glycan shields despite extensive glycosylation.
Yasunori Watanabe, Zachary T Berndsen, Jayna Raghwani, Gemma E Seabright, Joel D Allen, Oliver G Pybus, Jason S McLellan, Ian A Wilson, Thomas A Bowden, Andrew B Ward

Nat Commun· May 2020

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The origin, diagnosis, and prognosis of oligomannose-type diffuse large B-cell lymphoma.
Dylan J Tatterton, Maddy L Newby, Joel D Allen, Benjamin Sale, Giorgia Chiodin

Blood· December 2025

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Rational design of next-generation filovirus vaccines combining glycoprotein stabilization and nanoparticle display with glycan modification.
Yi-Zong Lee, Yi-Nan Zhang, Maddy L Newby, Garrett Ward, Keegan Braz Gomes, Joel D Allen

Nat Commun· December 2025

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From sequence to scaffold: Computational design of protein nanoparticle vaccines from AlphaFold2-predicted building blocks.
Cyrus M Haas, Naveen Jasti, Annie Dosey, Joel D Allen, Rebecca Gillespie

Proc Natl Acad Sci U S A· November 2025

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Antibody feedback establishes an affinity brake in the germinal center.
Yu Yan, Xuesong Wang, Zhenfei Xie, Daniel L V Bader, Ryan H Lim, Joel D Allen

bioRxiv· November 2025

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Structure-guided design of native-like HIV Env Single Chain Trimers for enhanced stability, immunogenicity, and versatile vaccine delivery.
Xuduo Li, Ipsita Krishnamurthy, Nitesh Mishra, Nicole E James, Rohan Roy Chowdhury, Joel D Allen

bioRxiv· October 2025

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Consistent Induction of Broadly Neutralizing HIV Antibodies by a Novel Two-Step Mechanism Informs Immunogen Design.
Ashwin N Skelly, Harry B Gristick, Hui Li, Edem Gavor, Andrew J Connell, Joel D Allen

bioRxiv· October 2025

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Germline-targeting HIV immunogen induces cross-neutralizing antibodies in outbred macaques.
Nitesh Mishra, Bo Liang, Ryan S Roark, Amrit Ghosh, Sean Callaghan, Joel D Allen

bioRxiv· October 2025

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Differential contributions of human oligosaccharyltransferase complexes OST-A and OST-B to HIV-1 envelope glycoprotein glycosylation.
Tugba Atabey, Ronald Derking, Maddy Newby, Joey Bouhuijs, Jonne Snitselaar, Joel D Allen

bioRxiv· September 2025

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Rational design of next-generation filovirus vaccines through glycoprotein stabilization, nanoparticle display, and glycan modification.
Yi-Zong Lee, Yi-Nan Zhang, Maddy L Newby, Garrett Ward, Keegan Braz Gomes, Joel D Allen

bioRxiv· August 2025

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Immunofocusing on the conserved fusion peptide of HIV envelope glycoprotein in rhesus macaques.
Payal P Pratap, Christopher A Cottrell, James Quinn, Diane G Carnathan, Daniel L V Bader, Joel D Allen

NPJ Vaccines· August 2025

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From sequence to scaffold: computational design of protein nanoparticle vaccines from AlphaFold2-predicted building blocks.
Cyrus M Haas, Naveen Jasti, Annie Dosey, Joel D Allen, Rebecca Gillespie

bioRxiv· August 2025

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Immunofocusing on the conserved fusion peptide of HIV envelope glycoprotein in rhesus macaques.
Payal P Pratap, Christopher A Cottrell, James Quinn, Diane G Carnathan, Daniel L V Bader, Joel D Allen

bioRxiv· June 2025

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Rapid acquisition of HIV-1 neutralization breadth in a rhesus V2 apex germline antibody mouse model after a single bolus immunization.
Amrit Raj Ghosh, Rumi Habib, Nitesh Mishra, Ryan S Roark, Madhav Akauliya, Joel D Allen

bioRxiv· June 2025

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Native-like soluble E1E2 glycoprotein heterodimers on self-assembling protein nanoparticles for hepatitis C virus vaccine design.
Linling He, Yi-Zong Lee, Yi-Nan Zhang, Maddy L Newby, Benjamin M Janus, Joel D Allen

bioRxiv· May 2025

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The Design and Immunogenicity of an HIV-1 Clade C Pediatric Envelope Glycoprotein Stabilized by Multiple Platforms.
Sanjeev Kumar, Iván Del Moral-Sánchez, Swarandeep Singh, Maddy L Newby, Joel D Allen

Vaccines (Basel)· January 2025

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Mosaic and mixed HIV-1 glycoprotein nanoparticles elicit antibody responses to broadly neutralizing epitopes.
Mitch Brinkkemper, Gius Kerster, Philip J M Brouwer, Andy S Tran, Jonathan L Torres, Joel D Allen

PLoS Pathog· October 2024

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Impact of glycan depletion, glycan debranching and increased glycan charge on HIV-1 neutralization sensitivity and immunogenicity.
Alessio D'Addabbo, Tommy Tong, Emma T Crooks, Keiko Osawa, Jiamin Xu, Joel D Allen

Glycobiology· September 2024

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Design and immunogenicity of an HIV-1 clade C pediatric envelope glycoprotein stabilized by multiple platforms.
Sanjeev Kumar, Iván Del Moral-Sánchez, Swarandeep Singh, Maddy L Newby, Joel D Allen

bioRxiv· September 2024

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Germline-targeting HIV vaccination induces neutralizing antibodies to the CD4 binding site.
Tom G Caniels, Max Medina-Ramìrez, Shiyu Zhang, Sven Kratochvil, Yuejiao Xian, Joel D Allen

Sci Immunol· August 2024

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Author Correction: Vaccination induces broadly neutralizing antibody precursors to HIV gp41.
Torben Schiffner, Ivy Phung, Rashmi Ray, Adriana Irimia, Ming Tian, Joel D Allen

Nat Immunol· July 2024

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Priming antibody responses to the fusion peptide in rhesus macaques.
Christopher A Cottrell, Payal P Pratap, Kimberly M Cirelli, Diane G Carnathan, Chiamaka A Enemuo, Joel D Allen

NPJ Vaccines· July 2024

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Vaccination induces broadly neutralizing antibody precursors to HIV gp41.
Torben Schiffner, Ivy Phung, Rashmi Ray, Adriana Irimia, Ming Tian, Joel D Allen

Nat Immunol· June 2024

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Vaccine priming of rare HIV broadly neutralizing antibody precursors in nonhuman primates.
Jon M Steichen, Ivy Phung, Eugenia Salcedo, Gabriel Ozorowski, Jordan R Willis, Joel D Allen

Science· May 2024

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Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines.
Iván Del Moral-Sánchez, Edmund G Wee, Yuejiao Xian, Wen-Hsin Lee, Joel D Allen

NPJ Vaccines· April 2024

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Mechanisms of SARS-CoV-2 Inactivation Using UVC Laser Radiation.
George Devitt, Peter B Johnson, Niall Hanrahan, Simon I R Lane, Magdalena C Vidale, Joel D Allen

ACS Photonics· January 2024

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