Publications by authors named "John C Mu"

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LongISLND: in silico sequencing of lengthy and noisy datatypes.
Bayo Lau, Marghoob Mohiyuddin, John C Mu, Li Tai Fang, Narges Bani Asadi

Bioinformatics· December 2016

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Computational Aspects of Optional Pólya Tree.
Hui Jiang, John Chong Mu, Kun Yang, Chao Du, Luo Lu

J Comput Graph Stat· March 2016

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An ensemble approach to accurately detect somatic mutations using SomaticSeq.
Li Tai Fang, Pegah Tootoonchi Afshar, Aparna Chhibber, Marghoob Mohiyuddin, Yu Fan, John C Mu

Genome Biol· September 2015

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Leveraging long read sequencing from a single individual to provide a comprehensive resource for benchmarking variant calling methods.
John C Mu, Pegah Tootoonchi Afshar, Marghoob Mohiyuddin, Xi Chen, Jian Li

Sci Rep· September 2015

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MetaSV: an accurate and integrative structural-variant caller for next generation sequencing.
Marghoob Mohiyuddin, John C Mu, Jian Li, Narges Bani Asadi, Mark B Gerstein

Bioinformatics· August 2015

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VarSim: a high-fidelity simulation and validation framework for high-throughput genome sequencing with cancer applications.
John C Mu, Marghoob Mohiyuddin, Jian Li, Narges Bani Asadi, Mark B Gerstein

Bioinformatics· May 2015

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Exploring the physiologic role of human gastroesophageal reflux by analyzing time-series data from 24-h gastric and esophageal pH recordings.
Luo Lu, John C Mu, Sheldon Sloan, Philip B Miner, Jerry D Gardner

Physiol Rep· July 2014

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Fast and accurate read alignment for resequencing.
John C Mu, Hui Jiang, Amirhossein Kiani, Marghoob Mohiyuddin, Narges Bani Asadi

Bioinformatics· September 2012

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Mutation of a U2 snRNA gene causes global disruption of alternative splicing and neurodegeneration.
Yichang Jia, John C Mu, Susan L Ackerman

Cell· January 2012

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