Publications by authors named "John Garbe"

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Population genomics traces zebra mussel invasions along the expanding western North American front in Minnesota, USA to their source waters.
Michael A McCartney, Sophie Mallez, Shea Anderson, John Garbe, Víctor H Hernández-Elizárraga

Sci Rep· December 2025

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Deterministic genetic barcoding for multiplexed behavioral and single-cell transcriptomic studies.
Jorge Blanco Mendana, Margaret Donovan, Lindsey Gengelbach O'Brien, Benjamin Auch, John Garbe

Elife· February 2025

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Long-read sequencing and optical genome mapping identify causative gene disruptions in noncoding sequence in two patients with neurologic disease and known chromosome abnormalities.
Kristen L Sund, Jie Liu, Joyce Lee, John Garbe, Zakia Abdelhamed

Am J Med Genet A· December 2024

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A Whole Genome Assembly and Annotation of .
Tyler J Garwood, Jessie E Richards, Marissa G Macchietto, Richard W Gerhold, Stephen A Kania, John R Garbe

J Nematol· March 2024

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The genome of the zebra mussel, Dreissena polymorpha: a resource for comparative genomics, invasion genetics, and biocontrol.
Michael A McCartney, Benjamin Auch, Thomas Kono, Sophie Mallez, Ying Zhang, John Garbe

G3 (Bethesda)· February 2022

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Development of an exosomal gene signature to detect residual disease in dogs with osteosarcoma using a novel xenograft platform and machine learning.
Kelly M Makielski, Alicia J Donnelly, Ali Khammanivong, Milcah C Scott, Andrea R Ortiz, John R Garbe

Lab Invest· December 2021

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Neither Donor nor Recipient Mitochondrial Haplotypes Are Associated with Unrelated Donor Transplant Outcomes: A Validation Study from the CIBMTR.
Logan G Spector, Stephen R Spellman, Bharat Thyagarajan, Kenneth B Beckman, Cody Hoffmann, John Garbe

Transplant Cell Ther· October 2021

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Dissecting and tuning primer editing by proofreading polymerases.
Daryl M Gohl, Benjamin Auch, Amanda Certano, Brice LeFrançois, Anne Bouevitch, John Garbe

Nucleic Acids Res· September 2021

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A rapid, cost-effective tailed amplicon method for sequencing SARS-CoV-2.
Daryl M Gohl, John Garbe, Patrick Grady, Jerry Daniel, Ray H B Watson

BMC Genomics· December 2020

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Measuring sequencer size bias using REcount: a novel method for highly accurate Illumina sequencing-based quantification.
Daryl M Gohl, Alessandro Magli, John Garbe, Aaron Becker, Darrell M Johnson

Genome Biol· April 2019

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EditR: A Method to Quantify Base Editing from Sanger Sequencing.
Mitchell G Kluesner, Derek A Nedveck, Walker S Lahr, John R Garbe, Juan E Abrahante

CRISPR J· June 2018

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A multitask clustering approach for single-cell RNA-seq analysis in Recessive Dystrophic Epidermolysis Bullosa.
Huanan Zhang, Catherine A A Lee, Zhuliu Li, John R Garbe, Cindy R Eide

PLoS Comput Biol· April 2018

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Genomic Inbreeding and Relatedness in Wild Panda Populations.
John R Garbe, Dzianis Prakapenka, Cheng Tan, Yang Da

PLoS One· August 2017

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Heterotypic mouse models of canine osteosarcoma recapitulate tumor heterogeneity and biological behavior.
Milcah C Scott, Hirotaka Tomiyasu, John R Garbe, Ingrid Cornax, Clarissa Amaya

Dis Model Mech· December 2016

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Systematic improvement of amplicon marker gene methods for increased accuracy in microbiome studies.
Daryl M Gohl, Pajau Vangay, John Garbe, Allison MacLean, Adam Hauge

Nat Biotechnol· September 2016

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Efficient nonmeiotic allele introgression in livestock using custom endonucleases.
Wenfang Tan, Daniel F Carlson, Cheryl A Lancto, John R Garbe, Dennis A Webster

Proc Natl Acad Sci U S A· October 2013

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Strategies for selection marker-free swine transgenesis using the Sleeping Beauty transposon system.
Daniel F Carlson, John R Garbe, Wenfang Tan, Mike J Martin, John R Dobrinsky

Transgenic Res· October 2011

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Development and application of bovine and porcine oligonucleotide arrays with protein-based annotation.
John R Garbe, Christine G Elsik, Eric Antoniou, James M Reecy, Karl J Clark

J Biomed Biotechnol· April 2011

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Efficient mammalian germline transgenesis by cis-enhanced Sleeping Beauty transposition.
Daniel F Carlson, Aron M Geurts, John R Garbe, Chang-Won Park, Artur Rangel-Filho

Transgenic Res· February 2011

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Genome-wide analysis of single-locus and epistasis single-nucleotide polymorphism effects on anti-cyclic citrullinated peptide as a measure of rheumatoid arthritis.
Li Ma, Daniel Dvorkin, John R Garbe, Yang Da

BMC Proc· December 2009

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Parallel and serial computing tools for testing single-locus and epistatic SNP effects of quantitative traits in genome-wide association studies.
Li Ma, H Birali Runesha, Daniel Dvorkin, John R Garbe, Yang Da

BMC Bioinformatics· July 2008

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Linkage analysis for mapping genes of sex-influenced traits.
Nicole R London, John R Garbe, Sheila M Schmutz, Mitchell S Abrahamsen, Yang Da

Mamm Genome· April 2003

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