Publications by authors named "John P Rose"

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Characterization of Peptide-Preservative Interaction by AlphaFold, Molecular Dynamics Simulation, and NMR Spectroscopy.
Vinicius Martins de Oliveira, Luke Arbogast, Dan Xie, Pradyumn Sharma, Lina Aboulmouna, John P Rose

Mol Pharm· December 2025

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The Impact of Permeation Enhancers on Transcellular Permeation of Small Molecule Drugs.
Mabel Bernaldez, Christopher Kang, Stephen D Stamatis, John P Rose, Rui Sun

J Phys Chem B· June 2025

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Identification of glycosyltransferases mediating 2-O-arabinopyranosyl and 2-O-galactosyl substitutions of glucuronosyl side chains of xylan.
Ruiqin Zhong, Dayong Zhou, Dennis R Phillips, Earle R Adams, Lirong Chen, John P Rose

Plant J· October 2024

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Plant Cell Wall Polysaccharide -Acetyltransferases.
Ruiqin Zhong, Dayong Zhou, Lirong Chen, John P Rose, Bi-Cheng Wang

Plants (Basel)· August 2024

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A rice GT61 glycosyltransferase possesses dual activities mediating 2-O-xylosyl and 2-O-arabinosyl substitutions of xylan.
Ruiqin Zhong, Dayong Zhou, Dennis R Phillips, Earle R Adams, Lirong Chen, John P Rose

Planta· April 2024

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Interaction between Permeation Enhancers and Lipid Bilayers.
Christopher Kang, Mabel Bernaldez, Stephen D Stamatis, John P Rose, Rui Sun

J Phys Chem B· February 2024

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Assessing the Intestinal Permeability of Small Molecule Drugs via Diffusion Motion on a Multidimensional Free Energy Surface.
Alyson Shoji, Christopher Kang, Kazuumi Fujioka, John P Rose, Rui Sun

J Chem Theory Comput· January 2022

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Lilly Absorption Modeling Platform: A Tool for Early Absorption Assessment.
Stephen D Stamatis, John P Rose

Mol Pharm· January 2022

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Transactions from the 69th Annual Meeting of the American Crystallographic Association: Data best practices-current state and future needs.
Nicholas K Sauter, John P Rose, Talapady N Bhat

Struct Dyn· March 2020

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Relative Bioavailability Risk Assessment: A Systematic Approach to Assessing In Vivo Risk Associated With CM&C-Related Changes.
Aktham Aburub, David C Sperry, Shobha Bhattachar, Evelyn Lobo, Xuan Ding, John P Rose

J Pharm Sci· January 2019

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Molecular transport through membranes: Accurate permeability coefficients from multidimensional potentials of mean force and local diffusion constants.
Rui Sun, Yining Han, Jessica M J Swanson, Jeffrey S Tan, John P Rose

J Chem Phys· August 2018

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Transition-Tempered Metadynamics Is a Promising Tool for Studying the Permeation of Drug-like Molecules through Membranes.
Rui Sun, James F Dama, Jeffrey S Tan, John P Rose, Gregory A Voth

J Chem Theory Comput· October 2016

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SAD phasing: History, current impact and future opportunities.
John P Rose, Bi-Cheng Wang

Arch Biochem Biophys· July 2016

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Native SAD is maturing.
John P Rose, Bi-Cheng Wang, Manfred S Weiss

IUCrJ· July 2015

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Effective absorption modeling in relative bioavailability study risk assessment.
John P Rose

AAPS J· December 2012

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The structure of augmenter of liver regeneration crystallized in the presence of 50 mM CdCl2 reveals a novel Cd2Cl4O6 cluster that aids in crystal packing.
Quentin Florence, Chia-Kuei Wu, Jeffrey Habel, J Tucker Swindell, Bi-Cheng Wang, John P Rose

Acta Crystallogr D Biol Crystallogr· September 2012

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Developability assessment of clinical drug products with maximum absorbable doses.
Xuan Ding, John P Rose, Jan Van Gelder

Int J Pharm· May 2012

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Structure based mechanism of the Ca(2+)-induced release of coelenterazine from the Renilla binding protein.
Galina A Stepanyuk, Zhi-Jie Liu, Eugene S Vysotski, John Lee, John P Rose

Proteins· February 2009

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The first agmatine/cadaverine aminopropyl transferase: biochemical and structural characterization of an enzyme involved in polyamine biosynthesis in the hyperthermophilic archaeon Pyrococcus furiosus.
Giovanna Cacciapuoti, Marina Porcelli, Maria Angela Moretti, Francesca Sorrentino, Luigi Concilio, John P Rose

J Bacteriol· August 2007

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Characterization of a corrinoid protein involved in the C1 metabolism of strict anaerobic bacterium Moorella thermoacetica.
Amaresh Das, Zheng-Qing Fu, Wolfram Tempel, Zhi-Jie Liu, Jessie Chang, John P Rose

Proteins· April 2007

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Structural and transcriptional analyses of a purine nucleotide-binding protein from Pyrococcus furiosus: a component of a novel, membrane-bound multiprotein complex unique to this hyperthermophilic archaeon.
Brian Gerwe, Laura-Lee Clancy Kelley, Bret D Dillard, Thomas Lai, Zhi-Jie Liu, John P Rose

J Struct Funct Genomics· March 2007

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Structural basis of CoA recognition by the Pyrococcus single-domain CoA-binding proteins.
Takuya B Hiyama, Min Zhao, Yu Kitago, Min Yao, Shun-Ichi Sekine, John P Rose

J Struct Funct Genomics· December 2006

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Reconstruction of ancient genome and gene order from complete microbial genome sequences.
Yuhong Wang, Wei Li, Tongtong Zhang, Chuanfang Ding, Zhibin Lu, John P Rose

J Theor Biol· April 2006

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A non-natural dinucleotide containing an isomeric L-related deoxynucleoside: dinucleotide inhibitors of anti-HIV integrase activity.
M Gary Newton, Charles F Campana, Guo Chen Chi, Doowon Lee, Zhi Jie Liu, John P Rose

Acta Crystallogr C· August 2005

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Isolation, crystallization and preliminary X-ray analysis of a methanol-induced corrinoid protein from Moorella thermoacetica.
Weihong Zhou, Amaresh Das, Jeff E Habel, Zhi-Jie Liu, Jessie Chang, John P Rose

Acta Crystallogr Sect F Struct Biol Cryst Commun· May 2005

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