Publications by authors named "John R Roth"

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Resolution of acute kidney injury following intensive dialysis for oxalate nephropathy.
John R Roth, Alessia Buglioni, Neera K Dahl

Clin Nephrol· December 2025

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Integration of the pSLT Plasmid into the Chromosome Results in a Temperature-Sensitive Growth Defect Due to Aberrant DNA Replication.
Christopher E Wozniak, Jordan J Hendriksen, Baldomero M Olivera, John R Roth, Kelly T Hughes

J Bacteriol· September 2020

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Selective Inbreeding: Genetic Crosses Drive Apparent Adaptive Mutation in the Cairns-Foster System of .
Amanda Nguyen, Sophie Maisnier-Patin, Itsugo Yamayoshi, Eric Kofoid, John R Roth

Genetics· February 2020

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Selection and Plasmid Transfer Underlie Adaptive Mutation in .
Sophie Maisnier-Patin, John R Roth

Genetics· November 2018

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Selection-Enhanced Mutagenesis of Genes Is Due to Their Coamplification with Encoding an Error-Prone DNA Polymerase.
Itsugo Yamayoshi, Sophie Maisnier-Patin, John R Roth

Genetics· March 2018

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The Promiscuous sumA Missense Suppressor from Salmonella enterica Has an Intriguing Mechanism of Action.
Ashley E Cole, Fatmah M Hani, Ronni Altman, Megan Meservy, John R Roth

Genetics· February 2017

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Reinterpreting Long-Term Evolution Experiments: Is Delayed Adaptation an Example of Historical Contingency or a Consequence of Intermittent Selection?
John R Roth, Sophie Maisnier-Patin

J Bacteriol· February 2016

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The Origin of Mutants Under Selection: How Natural Selection Mimics Mutagenesis (Adaptive Mutation).
Sophie Maisnier-Patin, John R Roth

Cold Spring Harb Perspect Biol· July 2015

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Mechanisms of gene duplication and amplification.
Andrew B Reams, John R Roth

Cold Spring Harb Perspect Biol· February 2015

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Plasmid copy number underlies adaptive mutability in bacteria.
Emiko Sano, Sophie Maisnier-Patin, John Paul Aboubechara, Semarhy Quiñones-Soto, John R Roth

Genetics· November 2014

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Recombination and annealing pathways compete for substrates in making rrn duplications in Salmonella enterica.
Andrew B Reams, Eric Kofoid, Natalie Duleba, John R Roth

Genetics· January 2014

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Evidence that a metabolic microcompartment contains and recycles private cofactor pools.
Douglas L Huseby, John R Roth

J Bacteriol· June 2013

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Pathways of genetic adaptation: multistep origin of mutants under selection without induced mutagenesis in Salmonella enterica.
Semarhy Quiñones-Soto, Andrew B Reams, John R Roth

Genetics· November 2012

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Multiple pathways of duplication formation with and without recombination (RecA) in Salmonella enterica.
Andrew B Reams, Eric Kofoid, Elisabeth Kugelberg, John R Roth

Genetics· October 2012

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Real-time evolution of new genes by innovation, amplification, and divergence.
Joakim Näsvall, Lei Sun, John R Roth, Dan I Andersson

Science· October 2012

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Poxvirus use a "gene accordion" to tune out host defenses.
John R Roth, D I Andersson

Cell· August 2012

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The Origin of Mutants under Selection: Interactions of Mutation, Growth, and Selection.
Dan I Andersson, Diarmaid Hughes, John R Roth

EcoSal Plus· December 2011

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Intestinal inflammation allows Salmonella to use ethanolamine to compete with the microbiota.
Parameth Thiennimitr, Sebastian E Winter, Maria G Winter, Mariana N Xavier, Vladimir Tolstikov, John R Roth

Proc Natl Acad Sci U S A· October 2011

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Effect of growth under selection on appearance of chromosomal mutations in Salmonella enterica.
Semarhy Quiñones-Soto, John R Roth

Genetics· September 2011

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The joys and terrors of fast adaptation: new findings elucidate antibiotic resistance and natural selection.
John R Roth

Mol Microbiol· January 2011

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Gut inflammation provides a respiratory electron acceptor for Salmonella.
Sebastian E Winter, Parameth Thiennimitr, Maria G Winter, Brian P Butler, Douglas L Huseby, John R Roth

Nature· September 2010

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The tandem inversion duplication in Salmonella enterica: selection drives unstable precursors to final mutation types.
Elisabeth Kugelberg, Eric Kofoid, Dan I Andersson, Yong Lu, Joseph Mellor, Frederick P Roth, John R Roth

Genetics· May 2010

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Duplication frequency in a population of Salmonella enterica rapidly approaches steady state with or without recombination.
Andrew B Reams, Eric Kofoid, Michael Savageau, John R Roth

Genetics· April 2010

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Genetic adaptation: a new piece for a very old puzzle.
John R Roth

Curr Biol· January 2010

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Contribution of gene amplification to evolution of increased antibiotic resistance in Salmonella typhimurium.
Song Sun, Otto G Berg, John R Roth, Dan I Andersson

Genetics· August 2009

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