Publications by authors named "John Sundh"

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HAPP: High-accuracy pipeline for processing deep metabarcoding data.
John Sundh, Emma Granqvist, Ela Iwaszkiewicz-Eggebrecht, Lokeshwaran Manoharan, Laura J A van Dijk

PLoS Comput Biol· November 2025

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Towards high-throughput parallel imaging and single-cell transcriptomics of microbial eukaryotic plankton.
Vesna Grujčić, Sami Saarenpää, John Sundh, Bengt Sennblad, Benjamin Norgren

PLoS One· January 2024

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New chemical and microbial perspectives on vitamin B1 and vitamer dynamics of a coastal system.
Meriel J Bittner, Catherine C Bannon, Elden Rowland, John Sundh, Erin M Bertrand

ISME Commun· January 2024

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Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae).
Karin Steffen, Estelle Proux-Wéra, Lucile Soler, Allison Churcher, John Sundh

G3 (Bethesda)· September 2023

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Metatranscriptomics of Nasopharyngeal Microbiota and Host Distinguish between Pneumonia and Health.
Priyanka Nannapaneni, John Sundh, Stefanie Prast-Nielsen, Samuel Rhedin, Åke Örtqvist

Am J Respir Crit Care Med· December 2022

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Metatranscriptomics captures dynamic shifts in mycorrhizal coordination in boreal forests.
Simon R Law, Alonso R Serrano, Yohann Daguerre, John Sundh, Andreas N Schneider

Proc Natl Acad Sci U S A· June 2022

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Composition and Seasonality of Membrane Transporters in Marine Picoplankton.
Åke Hagström, Ulla Li Zweifel, John Sundh, Christofer M G Osbeck, Carina Bunse

Front Microbiol· September 2021

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Energy efficiency and biological interactions define the core microbiome of deep oligotrophic groundwater.
Maliheh Mehrshad, Margarita Lopez-Fernandez, John Sundh, Emma Bell, Domenico Simone

Nat Commun· July 2021

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Comparative Fungal Community Analyses Using Metatranscriptomics and Internal Transcribed Spacer Amplicon Sequencing from Norway Spruce.
Andreas N Schneider, John Sundh, Görel Sundström, Kerstin Richau, Nicolas Delhomme

mSystems· February 2021

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Genome sequence of segmented filamentous bacteria present in the human intestine.
Hans Jonsson, Luisa W Hugerth, John Sundh, Eva Lundin, Anders F Andersson

Commun Biol· September 2020

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Identification of Novel Putative Bacterial Feruloyl Esterases From Anaerobic Ecosystems by Use of Whole-Genome Shotgun Metagenomics and Genome Binning.
Kamyar Mogodiniyai Kasmaei, John Sundh

Front Microbiol· November 2019

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Prevalent reliance of bacterioplankton on exogenous vitamin B1 and precursor availability.
Ryan W Paerl, John Sundh, Demeng Tan, Sine L Svenningsen, Samuel Hylander

Proc Natl Acad Sci U S A· October 2018

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BARM and BalticMicrobeDB, a reference metagenome and interface to meta-omic data for the Baltic Sea.
Johannes Alneberg, John Sundh, Christin Bennke, Sara Beier, Daniel Lundin

Sci Data· July 2018

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Meta-omic analyses of Baltic Sea cyanobacteria: diversity, community structure and salt acclimation.
Narin Celepli, John Sundh, Martin Ekman, Chris L Dupont, Shibu Yooseph

Environ Microbiol· February 2017

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Diversity and Expression of Bacterial Metacaspases in an Aquatic Ecosystem.
Johannes Asplund-Samuelsson, John Sundh, Chris L Dupont, Andrew E Allen, John P McCrow

Front Microbiol· July 2016

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