Publications by authors named "Jonathan B Grimm"

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Optimizing multifunctional fluorescent ligands for intracellular labeling.
Pratik Kumar, Jason D Vevea, Ariana N Tkachuk, Kirby R Campbell, Emma T Watson, Jonathan B Grimm

Proc Natl Acad Sci U S A· November 2025

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Relative phase of membrane potential theta oscillations between individual hippocampal neurons code space.
Mohamed Athif, Samantha Malmberg, Rebecca Mount, Kush Patel, Yangyang Wang, Jonathan B Grimm

bioRxiv· November 2025

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Aurora 2.0: A fluorogenic dye library for expanding the capability of protein-adaptive differential scanning fluorimetry (paDSF).
Annemarie F Charvat, Kayleigh Mason-Chalmers, Aneta Grabinska-Rogala, Shloka Shivakumar, Zachary Gale-Day, Jonathan B Grimm

SLAS Discov· September 2025

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designed bright, hyperstable rhodamine binders for fluorescence microscopy.
Yuda Chen, Klaus Yserentant, Kibeom Hong, Yiming Kuang, Arghya Bhowmick, Jonathan B Grimm

bioRxiv· June 2025

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DELTA: a method for brain-wide measurement of synaptic protein turnover reveals localized plasticity during learning.
Boaz Mohar, Gabriela Michel, Yi-Zhi Wang, Veronica Hernandez, Jonathan B Grimm

Nat Neurosci· May 2025

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EPSILON: a method for pulse-chase labeling to probe synaptic AMPAR exocytosis during memory formation.
Doyeon Kim, Pojeong Park, Xiuyuan Li, J David Wong-Campos, He Tian, Jonathan B Grimm

Nat Neurosci· May 2025

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Dendritic excitations govern back-propagation via a spike-rate accelerometer.
Pojeong Park, J David Wong-Campos, Daniel G Itkis, Byung Hun Lee, Yitong Qi, Jonathan B Grimm

Nat Commun· February 2025

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A modular chemigenetic calcium indicator for multiplexed in vivo functional imaging.
Helen Farrants, Yichun Shuai, William C Lemon, Christian Monroy Hernandez, Deng Zhang, Jonathan B Grimm

Nat Methods· October 2024

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Dendritic excitations govern back-propagation via a spike-rate accelerometer.
Pojeong Park, David Wong-Campos, Daniel G Itkis, Byung Hun Lee, Yitong Qi, Jonathan B Grimm

bioRxiv· May 2024

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Imaging the extracellular matrix in live tissues and organisms with a glycan-binding fluorophore.
Antonio Fiore, Guoqiang Yu, Jason J Northey, Ronak Patel, Thomas A Ravenscroft, Jonathan B Grimm

bioRxiv· May 2024

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Evaluation of the Cytosolic Uptake of HaloTag Using a pH-Sensitive Dye.
JoLynn B Giancola, Jonathan B Grimm, Joomyung V Jun, Yana D Petri, Luke D Lavis

ACS Chem Biol· April 2024

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Dynamic 1D search and processive nucleosome translocations by RSC and ISW2 chromatin remodelers.
Jee Min Kim, Claudia C Carcamo, Sina Jazani, Zepei Xie, Xinyu A Feng, Jonathan B Grimm

Elife· March 2024

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A series of spontaneously blinking dyes for super-resolution microscopy.
Katie L Holland, Sarah E Plutkis, Timothy A Daugird, Abhishek Sau, Jonathan B Grimm

bioRxiv· February 2024

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Dynamic 1D Search and Processive Nucleosome Translocations by RSC and ISW2 Chromatin Remodelers.
Jee Min Kim, Claudia C Carcamo, Sina Jazani, Zepei Xie, Xinyu A Feng, Jonathan B Grimm

bioRxiv· January 2024

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Mapping memories: pulse-chase labeling reveals AMPA receptor dynamics during memory formation.
Doyeon Kim, Pojeong Park, Xiuyuan Li, J David Wong Campos, He Tian, Jonathan B Grimm

bioRxiv· December 2023

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Optimized Red-Absorbing Dyes for Imaging and Sensing.
Jonathan B Grimm, Ariana N Tkachuk, Ronak Patel, S Thomas Hennigan, Alina Gutu

J Am Chem Soc· October 2023

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A modular chemigenetic calcium indicator enables in vivo functional imaging with near-infrared light.
Helen Farrants, Yichun Shuai, William C Lemon, Christian Monroy Hernandez, Shang Yang, Jonathan B Grimm

bioRxiv· July 2023

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Time-tagged ticker tapes for intracellular recordings.
Dingchang Lin, Xiuyuan Li, Eric Moult, Pojeong Park, Benjamin Tang, Jonathan B Grimm

Nat Biotechnol· May 2023

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Sensitivity optimization of a rhodopsin-based fluorescent voltage indicator.
Ahmed S Abdelfattah, Jihong Zheng, Amrita Singh, Yi-Chieh Huang, Daniel Reep, Jonathan B Grimm

Neuron· May 2023

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Voltage dynamics of dendritic integration and back-propagation .
J David Wong-Campos, Pojeong Park, Hunter Davis, Yitong Qi, He Tian, Jonathan B Grimm

bioRxiv· May 2023

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Caveat fluorophore: an insiders' guide to small-molecule fluorescent labels.
Jonathan B Grimm, Luke D Lavis

Nat Methods· February 2022

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Biosensors based on peptide exposure show single molecule conformations in live cells.
Bei Liu, Orrin J Stone, Michael Pablo, J Cody Herron, Ana T Nogueira, Jonathan B Grimm

Cell· October 2021

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Direct detection of SARS-CoV-2 RNA using high-contrast pH-sensitive dyes.
Timothy A Brown, Katherine S Schaefer, Arthur Tsang, Hyun Ah Yi, Jonathan B Grimm

J Biomol Tech· September 2021

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Enabling Photocatalytic Activation of Rapid Bioorthogonal Chemistry by Repurposing Silicon-Rhodamine Fluorophores as Cytocompatible Far-Red Photocatalysts.
Chuanqi Wang, He Zhang, Tao Zhang, Xiaoyu Zou, Hui Wang, Jonathan B Grimm

J Am Chem Soc· July 2021

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A General Method to Improve Fluorophores Using Deuterated Auxochromes.
Jonathan B Grimm, Liangqi Xie, Jason C Casler, Ronak Patel, Ariana N Tkachuk

JACS Au· May 2021

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