Publications by authors named "Jonathan Josephs-Spaulding"

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Role of common host genome variants in Childhood Acute Lymphoblastic Leukemia.
Theis Mikkelsen, Marianne Helenius, Mirella Ampatzidou, Andishe Attarbaschi, Liv Andres-Jensen, Jonathan Josephs-Spaulding

Leukemia· December 2025

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Metatranscriptomics-based metabolic modeling of patient-specific urinary microbiome during infection.
Jonathan Josephs-Spaulding, Hannah Clara Rettig, Johannes Zimmermann, Mariam Chkonia, Alexander Mischnik

NPJ Biofilms Microbiomes· September 2025

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Metabolic modeling elucidates phenformin and atpenin A5 as broad-spectrum antiviral drugs against RNA viruses.
Alina Renz, Mirjam Hohner, Raphaël Jami, Maximilian Breitenbach, Jonathan Josephs-Spaulding

Commun Biol· May 2025

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Reconstructing the transcriptional regulatory network of probiotic is enabled by transcriptomics and machine learning.
Jonathan Josephs-Spaulding, Akanksha Rajput, Ying Hefner, Richard Szubin, Archana Balasubramanian

mSystems· March 2024

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COVID-19 through Adverse Outcome Pathways: Building networks to better understand the disease - 3rd CIAO AOP Design Workshop.
Laure-Alix Clerbaux, Núria Amigó, Maria João Amorim, Anna Bal-Price, Sofia Batista Leite, Jonathan Josephs-Spaulding

ALTEX· April 2022

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Parkinson's Disease and the Metal-Microbiome-Gut-Brain Axis: A Systems Toxicology Approach.
Lady Johanna Forero-Rodríguez, Jonathan Josephs-Spaulding, Stefano Flor, Andrés Pinzón, Christoph Kaleta

Antioxidants (Basel)· December 2021

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Recurrent Urinary Tract Infections: Unraveling the Complicated Environment of Uncomplicated rUTIs.
Jonathan Josephs-Spaulding, Thøger Jensen Krogh, Hannah Clara Rettig, Mark Lyng, Mariam Chkonia

Front Cell Infect Microbiol· August 2021

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Medical Device Sterilization and Reprocessing in the Era of Multidrug-Resistant (MDR) Bacteria: Issues and Regulatory Concepts.
Jonathan Josephs-Spaulding, Om V Singh

Front Med Technol· February 2021

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Longitudinal Multi-omics Analyses Identify Responses of Megakaryocytes, Erythroid Cells, and Plasmablasts as Hallmarks of Severe COVID-19.
Joana P Bernardes, Neha Mishra, Florian Tran, Thomas Bahmer, Lena Best, Jonathan Josephs-Spaulding

Immunity· December 2020

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Quality antenatal care protects against low birth weight in 42 poor counties of Western China.
Hong Zhou, Anqi Wang, Xiaona Huang, Sufang Guo, Yuning Yang, Jonathan Josephs-Spaulding

PLoS One· October 2019

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Profiling the Gene Expression and DNA Methylation in the Mouse Brain after Ischemic Preconditioning.
Menghua Cai, Yan Zhu, Zinan Li, Jonathan Josephs-Spaulding, Yu Zhou

Neuroscience· May 2019

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Messenger RNA sequencing reveals similar mechanisms between neonatal and acute respiratory distress syndrome.
Hua Mei, Yuheng Zhang, Chunzhi Liu, Yayu Zhang, Chunli Liu, Jonathan Josephs-Spaulding

Mol Med Rep· January 2018

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The dietary diversity and stunting prevalence in minority children under 3 years old: a cross-sectional study in forty-two counties of Western China.
Anqi Wang, Robert W Scherpbier, Xiaona Huang, Sufang Guo, Yuning Yang, Jonathan Josephs-Spaulding

Br J Nutr· November 2017

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Human microbiome versus food-borne pathogens: friend or foe.
Jonathan Josephs-Spaulding, Erik Beeler, Om V Singh

Appl Microbiol Biotechnol· June 2016

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