Publications by authors named "Jonathan M Keith"

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Influencing public health policy with data-informed mathematical models of infectious diseases: Recent developments and new challenges.
Amani Alahmadi, Sarah Belet, Andrew Black, Deborah Cromer, Jennifer A Flegg, Jonathan M Keith

Epidemics· September 2020

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A comparison of approximate versus exact techniques for Bayesian parameter inference in nonlinear ordinary differential equation models.
Amani A Alahmadi, Jennifer A Flegg, Davis G Cochrane, Christopher C Drovandi, Jonathan M Keith

R Soc Open Sci· March 2020

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Delimiting a species' geographic range using posterior sampling and computational geometry.
Jonathan M Keith, Daniel Spring, Tom Kompas

Sci Rep· June 2019

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Bayesian change-point modeling with segmented ARMA model.
Farhana Sadia, Sarah Boyd, Jonathan M Keith

PLoS One· May 2019

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Agent-based models of malaria transmission: a systematic review.
Neal R Smith, James M Trauer, Manoj Gambhir, Jack S Richards, Richard J Maude, Jonathan M Keith

Malar J· August 2018

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Sequence Segmentation with changeptGUI.
Edward Tasker, Jonathan M Keith

Methods Mol Biol· January 2018

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Bayesian model of signal rewiring reveals mechanisms of gene dysregulation in acquired drug resistance in breast cancer.
A K M Azad, Alfons Lawen, Jonathan M Keith

PLoS One· September 2017

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Accurate phenotyping: Reconciling approaches through Bayesian model averaging.
Carla Chia-Ming Chen, Jonathan Macgregor Keith, Kerrie Lee Mengersen

PLoS One· April 2017

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Genome-wide identification of conserved intronic non-coding sequences using a Bayesian segmentation approach.
Manjula Algama, Edward Tasker, Caitlin Williams, Adam C Parslow, Robert J Bryson-Richardson, Jonathan M Keith

BMC Genomics· March 2017

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Erratum to: Sequence Segmentation with changeptGUI.
Edward Tasker, Jonathan M Keith

Methods Mol Biol· January 2017

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Discovery of putative small non-coding RNAs from the obligate intracellular bacterium Wolbachia pipientis.
Megan Woolfit, Manjula Algama, Jonathan M Keith, Elizabeth A McGraw, Jean Popovici

PLoS One· January 2016

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Sampling phylogenetic tree space with the generalized Gibbs sampler.
Jonathan M Keith

Cladistics· August 2015

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Prediction of signaling cross-talks contributing to acquired drug resistance in breast cancer cells by Bayesian statistical modeling.
A K M Azad, Alfons Lawen, Jonathan M Keith

BMC Syst Biol· January 2015

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Drosophila 3' UTRs are more complex than protein-coding sequences.
Manjula Algama, Christopher Oldmeadow, Edward Tasker, Kerrie Mengersen, Jonathan M Keith

PLoS One· December 2014

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Investigating genomic structure using changept: A Bayesian segmentation model.
Manjula Algama, Jonathan M Keith

Comput Struct Biotechnol J· July 2014

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Agent-based Bayesian approach to monitoring the progress of invasive species eradication programs.
Jonathan M Keith, Daniel Spring

Proc Natl Acad Sci U S A· August 2013

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Computational characterization of 3' splice variants in the GFAP isoform family.
Sarah E Boyd, Betina Nair, Sze Woei Ng, Jonathan M Keith, Jacqueline M Orian

PLoS One· November 2012

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A Bayesian method for comparing and combining binary classifiers in the absence of a gold standard.
Jonathan M Keith, Christian M Davey, Sarah E Boyd

BMC Bioinformatics· July 2012

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Model selection in Bayesian segmentation of multiple DNA alignments.
Christopher Oldmeadow, Jonathan M Keith

Bioinformatics· March 2011

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Multiple evolutionary rate classes in animal genome evolution.
Christopher Oldmeadow, Kerrie Mengersen, John S Mattick, Jonathan M Keith

Mol Biol Evol· April 2010

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Bayesian latent trait modeling of migraine symptom data.
Carla Chia Ming Chen, Jonathan M Keith, Dale R Nyholt, Nicholas G Martin, Kerrie L Mengersen

Hum Genet· August 2009

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Linkage and heritability analysis of migraine symptom groupings: a comparison of three different clustering methods on twin data.
Carla C M Chen, Kerrie L Mengersen, Jonathan M Keith, Nicholas G Martin, Dale R Nyholt

Hum Genet· June 2009

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Sequence segmentation.
Jonathan M Keith

Methods Mol Biol· July 2008

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Data, sequence analysis and evolution. Preface.
Jonathan M Keith

Methods Mol Biol· July 2008

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Delineating slowly and rapidly evolving fractions of the Drosophila genome.
Jonathan M Keith, Peter Adams, Stuart Stephen, John S Mattick

J Comput Biol· May 2008

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