Publications by authors named "Jonathan P Allen"

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A glyoxal-specific aldehyde signaling axis in Pseudomonas aeruginosa that influences quorum sensing and infection.
Christopher J Corcoran, Bonnie J Cuthbert, David G Glanville, Mailyn Terrado, Diana Valverde Mendez, Jonathan P Allen

Nat Commun· July 2025

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Forest and Trees: Exploring Bacterial Virulence with Genome-wide Association Studies and Machine Learning.
Jonathan P Allen, Evan Snitkin, Nathan B Pincus, Alan R Hauser

Trends Microbiol· July 2021

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Erratum for Pincus et al., "A Genome-Based Model to Predict the Virulence of Pseudomonas aeruginosa Isolates".
Nathan B Pincus, Egon A Ozer, Jonathan P Allen, Marcus Nguyen, James J Davis

mBio· February 2021

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Long-term Persistence of an Extensively Drug-Resistant Subclade of Globally Distributed Pseudomonas aeruginosa Clonal Complex 446 in an Academic Medical Center.
Nathan B Pincus, Kelly E R Bachta, Egon A Ozer, Jonathan P Allen, Olivia N Pura

Clin Infect Dis· September 2020

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A Genome-Based Model to Predict the Virulence of Pseudomonas aeruginosa Isolates.
Nathan B Pincus, Egon A Ozer, Jonathan P Allen, Marcus Nguyen, James J Davis

mBio· August 2020

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A comparative genomics approach identifies contact-dependent growth inhibition as a virulence determinant.
Jonathan P Allen, Egon A Ozer, George Minasov, Ludmilla Shuvalova, Olga Kiryukhina

Proc Natl Acad Sci U S A· March 2020

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Systemic infection facilitates transmission of Pseudomonas aeruginosa in mice.
Kelly E R Bachta, Jonathan P Allen, Bettina H Cheung, Cheng-Hsun Chiu, Alan R Hauser

Nat Commun· January 2020

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Diversity of Contact-Dependent Growth Inhibition Systems of .
Jonathan P Allen, Alan R Hauser

J Bacteriol· July 2019

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Multidimensional Assessment of the Host Response in Mechanically Ventilated Patients with Suspected Pneumonia.
James M Walter, Ziyou Ren, Tyrone Yacoub, Paul A Reyfman, Raj D Shah, Jonathan P Allen

Am J Respir Crit Care Med· May 2019

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Characterization of the core and accessory genomes of Pseudomonas aeruginosa using bioinformatic tools Spine and AGEnt.
Egon A Ozer, Jonathan P Allen, Alan R Hauser

BMC Genomics· August 2014

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Shanghai fever: a distinct Pseudomonas aeruginosa enteric disease.
Chih-Hsien Chuang, Yi-Hsin Wang, Hsin-Ju Chang, Hsiu-Ling Chen, Yhu-Chering Huang, Jonathan P Allen

Gut· May 2014

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Different paths to pathogenesis.
Jonathan P Allen, Egon A Ozer, Alan R Hauser

Trends Microbiol· April 2014

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Zebrafish as a natural host model for Vibrio cholerae colonization and transmission.
Donna L Runft, Kristie C Mitchell, Basel H Abuaita, Jonathan P Allen, Sarah Bajer

Appl Environ Microbiol· March 2014

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Bacterial and clinical characteristics of health care- and community-acquired bloodstream infections due to Pseudomonas aeruginosa.
Angela Hattemer, Alan Hauser, Maureen Diaz, Marc Scheetz, Nirav Shah, Jonathan P Allen

Antimicrob Agents Chemother· August 2013

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Draft genome sequence of the Pseudomonas aeruginosa bloodstream isolate PABL056.
Egon A Ozer, Jonathan P Allen, Alan R Hauser

J Bacteriol· November 2012

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CpsY influences Streptococcus iniae cell wall adaptations important for neutrophil intracellular survival.
Jonathan P Allen, Melody N Neely

Infect Immun· May 2012

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The Streptococcus iniae transcriptional regulator CpsY is required for protection from neutrophil-mediated killing and proper growth in vitro.
Jonathan P Allen, Melody N Neely

Infect Immun· November 2011

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Trolling for the ideal model host: zebrafish take the bait.
Jonathan P Allen, Melody N Neely

Future Microbiol· April 2010

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Purification and characterization of enterocin 62-6, a two-peptide bacteriocin produced by a vaginal strain of Enterococcus faecium: Potential significance in bacterial vaginosis.
Diane C Dezwaan, Michael J Mequio, Julia S Littell, Jonathan P Allen, Silvia Rossbach

Microb Ecol Health Dis· July 2007

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The microbial community structure in petroleum-contaminated sediments corresponds to geophysical signatures.
Jonathan P Allen, Estella A Atekwana, Eliot A Atekwana, Joseph W Duris, D Dale Werkema

Appl Environ Microbiol· May 2007

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Iris melanoma: pathology, prognosis and surgical intervention.
Oliver D Starr, Dipika V Patel, Jonathan P Allen, Charles N J McGhee

Clin Exp Ophthalmol· June 2004

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