Publications by authors named "Joseph M Foster"

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Comparing mutation calls in fixed tumour samples between the affymetrix OncoScan® array and PCR based next-generation sequencing.
Henry M Wood, Joseph M Foster, Morag Taylor, Emma Tinkler-Hundal, Fiona S Togneri

BMC Med Genomics· March 2017

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Genomic complexity of urothelial bladder cancer revealed in urinary cfDNA.
Fiona S Togneri, Douglas G Ward, Joseph M Foster, Adam J Devall, Paula Wojtowicz

Eur J Hum Genet· August 2016

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HER2 overexpression and amplification as a potential therapeutic target in colorectal cancer: analysis of 3256 patients enrolled in the QUASAR, FOCUS and PICCOLO colorectal cancer trials.
Susan D Richman, Katie Southward, Philip Chambers, Debra Cross, Jennifer Barrett, Joseph M Foster

J Pathol· March 2016

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Cross-laboratory validation of the OncoScan® FFPE Assay, a multiplex tool for whole genome tumour profiling.
Joseph M Foster, Assa Oumie, Fiona S Togneri, Fabiana Ramos Vasques, Debra Hau

BMC Med Genomics· February 2015

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LipidHome: a database of theoretical lipids optimized for high throughput mass spectrometry lipidomics.
Joseph M Foster, Pablo Moreno, Antonio Fabregat, Henning Hermjakob, Christoph Steinbeck

PLoS One· December 2013

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From Peptidome to PRIDE: public proteomics data migration at a large scale.
Attila Csordas, Rui Wang, Daniel Ríos, Florian Reisinger, Joseph M Foster

Proteomics· May 2013

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PRIDE Cluster: building a consensus of proteomics data.
Johannes Griss, Joseph M Foster, Henning Hermjakob, Juan Antonio Vizcaíno

Nat Methods· February 2013

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The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013.
Juan Antonio Vizcaíno, Richard G Côté, Attila Csordas, José A Dianes, Antonio Fabregat, Joseph M Foster

Nucleic Acids Res· January 2013

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PRIDE: quality control in a proteomics data repository.
Attila Csordas, David Ovelleiro, Rui Wang, Joseph M Foster, Daniel Ríos

Database (Oxford)· June 2012

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Chromatographic retention time prediction for posttranslationally modified peptides.
Luminita Moruz, An Staes, Joseph M Foster, Maria Hatzou, Evy Timmerman

Proteomics· April 2012

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PRIDE Inspector: a tool to visualize and validate MS proteomics data.
Rui Wang, Antonio Fabregat, Daniel Ríos, David Ovelleiro, Joseph M Foster

Nat Biotechnol· February 2012

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Bioinformatics challenges in the proteomic analysis of human plasma.
Joseph M Foster, Lennart Martens

Methods Mol Biol· July 2011

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A posteriori quality control for the curation and reuse of public proteomics data.
Joseph M Foster, Sven Degroeve, Laurent Gatto, Matthieu Visser, Rui Wang

Proteomics· June 2011

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Proteomics data repositories: providing a safe haven for your data and acting as a springboard for further research.
Juan Antonio Vizcaíno, Joseph M Foster, Lennart Martens

J Proteomics· October 2010

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The Proteomics Identifications database: 2010 update.
Juan Antonio Vizcaíno, Richard Côté, Florian Reisinger, Harald Barsnes, Joseph M Foster

Nucleic Acids Res· January 2010

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A guide to the Proteomics Identifications Database proteomics data repository.
Juan Antonio Vizcaíno, Richard Côté, Florian Reisinger, Joseph M Foster, Michael Mueller

Proteomics· September 2009

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