Publications by authors named "Josh Colston"

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Comparison of ARIMA and FB-Prophet time series models for the prediction of national and regional malaria incidence in Uganda.
Benjamin Fuller, Richard Ssekitoleko, Caroline Kyozira, Josh M Colston, Issa Makumbi

Malar J· September 2025

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Updating global estimates of pathogen-attributable diarrhoeal disease burden: a methodology and integrated protocol for a broad-scope systematic review of a syndrome with diverse infectious aetiologies.
Josh M Colston, Thomas G Flynn, Andrea H Denton, Francesca Schiaffino, Shannon E Majowicz

BMJ Open· April 2025

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Epstein-Barr Virus in the RIVERA Case-Control Study of Acute Febrile Illness: Acute Mononucleosis Nearly Absent as an Etiology in the Peruvian Amazon.
Thomas G Flynn, Maribel Paredes Olortegui, Paul F Garcia Bardales, Francesca Schiaffino, Tackeshy N Pinedo Vasquez, Josh M Colston

Am J Trop Med Hyg· January 2025

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Spatial variation in housing construction material in low- and middle-income countries: A Bayesian spatial prediction model of a key infectious diseases risk factor and social determinant of health.
Josh M Colston, Bin Fang, Malena K Nong, Pavel Chernyavskiy, Navya Annapareddy

PLOS Glob Public Health· December 2024

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Genomic Epidemiology of 2023-2024 Oropouche Outbreak in Iquitos, Peru reveals independent origin from a concurrent outbreak in Brazil.
Maribel Paredes Olortegui, Francesca Schiaffino, Pablo Peñataro Yori, Josh M Colston, Valentino Shapiama Lopez

medRxiv· December 2024

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The epidemiology and impact of persistent infections on childhood growth among children 0-24 months of age in resource-limited settings.
Francesca Schiaffino, Josh M Colston, Maribel Paredes Olortegui, Pablo Peñataro Yori, Evangelos Mourkas

EClinicalMedicine· October 2024

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Assessment and comparison of model estimated and directly observed weather data for prediction of diarrhoea aetiology.
Ben J Brintz, Josh M Colston, Sharia M Ahmed, Dennis L Chao, Benjamin F Zaitchik

Epidemiol Infect· October 2024

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Efficacy of Single-Dose Albendazole and Albendazole Plus Ivermectin for Soil-Transmitted Helminth Infection in Children in the Peruvian Amazon.
Greisi Curico, Paul F Garcia Bardales, Tackeshy N Pinedo Vasquez, Wagner Valentino Shapiama Lopez, Maribel Paredes Olortegui, Josh M Colston

Am J Trop Med Hyg· July 2024

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Geographic Variation and Environmental Predictors of Nontuberculous Mycobacteria in Laboratory Surveillance, Virginia, USA, 2021-2023.
Brendan Mullen, Eric R Houpt, Josh Colston, Lea Becker, Sharon Johnson

Emerg Infect Dis· March 2024

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The Enterics for Global Health (EFGH) Surveillance Study in Peru.
Katia Manzanares Villanueva, Tackeshy Pinedo Vasquez, Pablo Peñataro Yori, Lucero Romaina Cacique, Paul F Garcia Bardales, Josh M Colston

Open Forum Infect Dis· March 2024

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Population Enumeration and Household Utilization Survey Methods in the Enterics for Global Health (EFGH): Surveillance Study.
Ryan Dodd, Alex O Awuor, Paul F Garcia Bardales, Farhana Khanam, Donnie Mategula, Josh M Colston

Open Forum Infect Dis· March 2024

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The Planetary Child Health & Enterics Observatory (Plan-EO): A protocol for an interdisciplinary research initiative and web-based dashboard for mapping enteric infectious diseases and their risk factors and interventions in LMICs.
Josh M Colston, Bin Fang, Eric Houpt, Pavel Chernyavskiy, Samarth Swarup

PLoS One· February 2024

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The Planetary Child Health & Enterics Observatory (Plan-EO): a protocol for an interdisciplinary research initiative and web-based dashboard for mapping enteric infectious diseases and their risk factors and interventions in LMICs.
Josh M Colston, Pavel Chernyavskiy, Lauren Gardner, Malena Nong, Bin Fang

Res Sq· January 2024

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Elucidating the Impacts of Climate on Dengue Transmission Through Mathematical Models: New Evidence From a Recent Outbreak on the Island of Réunion.
Josh M Colston

J Infect Dis· January 2024

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Assessment of Model Estimated and Directly Observed Weather Data for Etiological Prediction of Diarrhea.
Ben J Brintz, Josh M Colston, Sharia M Ahmed, Dennis L Chao, Ben Zaitschik

medRxiv· October 2023

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Etiology of acute febrile illness in the peruvian amazon as determined by modular formatted quantitative PCR: a protocol for RIVERA, a health facility-based case-control study.
Pablo Peñataro Yori, Maribel Paredes Olórtegui, Francesca Schiaffino, Josh M Colston, Tackeshy Pinedo Vasquez

BMC Public Health· April 2023

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Effects of hydrometeorological and other factors on SARS-CoV-2 reproduction number in three contiguous countries of tropical Andean South America: a spatiotemporally disaggregated time series analysis.
Josh M Colston, Patrick Hinson, Nhat-Lan H Nguyen, Yen Ting Chen, Hamada S Badr

IJID Reg· March 2023

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Spatiotemporal variation in risk of Shigella infection in childhood: a global risk mapping and prediction model using individual participant data.
Hamada S Badr, Josh M Colston, Nhat-Lan H Nguyen, Yen Ting Chen, Eleanor Burnett

Lancet Glob Health· March 2023

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Evolving Drivers of Brazilian SARS-CoV-2 Transmission: A Spatiotemporally Disaggregated Time Series Analysis of Meteorology, Policy, and Human Mobility.
Gaige Hunter Kerr, Hamada S Badr, Alisson F Barbieri, Josh M Colston, Lauren M Gardner

Geohealth· March 2023

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Etiology of Acute Febrile Illness in the Peruvian Amazon as determined by modular formatted quantitative PCR: A Protocol for RIVERA, a Health Facility-Based Case-Control Study.
Pablo Peñataro Yori, Maribel Paredes Olórtegui, Francesca Schiaffino, Karin Perez, Greisi Curico Huansi, Josh M Colston

Res Sq· March 2023

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Antibiotic Use and Stewardship Practices in a Pediatric Community-based Cohort Study in Peru: Shorter Would be Sweeter.
Francesca Schiaffino, Josh M Colston, Maribel Paredes Olortegui, Silvia Rengifo Pinedo, Marcelo Zamora Babilonia

Clin Infect Dis· February 2023

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Incorporating COVID-19 into Acute Febrile Illness Surveillance Systems, Belize, Kenya, Ethiopia, Peru, and Liberia, 2020-2021.
David C Shih, Rachel Silver, Olga L Henao, Aynalem Alemu, Allan Audi, Josh M Colston

Emerg Infect Dis· December 2022

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Enteropathy Markers in Early Life Were Associated with Adipokine, Apolipoprotein, and Cytokine Profiles Consistent with an Adverse Cardiometabolic Disease Risk Profile Later in Childhood in a Peruvian Birth Cohort.
Josh M Colston, Yen Ting Chen, Patrick Hinson, Nhat-Lan H Nguyen, Pablo Peñataro Yori

Am J Trop Med Hyg· October 2022

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Intestinal Colonization With Subspecies Is Associated With Length at Birth, Exclusive Breastfeeding, and Decreased Risk of Enteric Virus Infections, but Not With Histo-Blood Group Antigens, Oral Vaccine Response or Later Growth in Three Birth Cohorts.
Josh M Colston, Mami Taniuchi, Tahmina Ahmed, Tania Ferdousi, Furqan Kabir

Front Pediatr· February 2022

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