Publications by authors named "Joshua D Fortriede"

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The Xenopus phenotype ontology: bridging model organism phenotype data to human health and development.
Malcolm E Fisher, Erik Segerdell, Nicolas Matentzoglu, Mardi J Nenni, Joshua D Fortriede

BMC Bioinformatics· March 2022

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Xenbase: deep integration of GEO & SRA RNA-seq and ChIP-seq data in a model organism database.
Joshua D Fortriede, Troy J Pells, Stanley Chu, Praneet Chaturvedi, DongZhuo Wang

Nucleic Acids Res· January 2020

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Xenbase: Facilitating the Use of to Model Human Disease.
Mardi J Nenni, Malcolm E Fisher, Christina James-Zorn, Troy J Pells, Virgilio Ponferrada, Joshua D Fortriede

Front Physiol· February 2019

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Xenbase: a genomic, epigenomic and transcriptomic model organism database.
Kamran Karimi, Joshua D Fortriede, Vaneet S Lotay, Kevin A Burns, Dong Zhou Wang

Nucleic Acids Res· January 2018

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Clustered Xenopus keratin genes: A genomic, transcriptomic, and proteomic analysis.
Ken-Ichi T Suzuki, Miyuki Suzuki, Mitsuki Shigeta, Joshua D Fortriede, Shuji Takahashi

Dev Biol· June 2017

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The Xenopus ORFeome: A resource that enables functional genomics.
Ian M Grant, Dawit Balcha, Tong Hao, Yun Shen, Prasad Trivedi, Joshua D Fortriede

Dev Biol· December 2015

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Xenbase: Core features, data acquisition, and data processing.
Christina James-Zorn, Virgillio G Ponferrada, Kevin A Burns, Joshua D Fortriede, Vaneet S Lotay

Genesis· August 2015

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Xenbase, the Xenopus model organism database; new virtualized system, data types and genomes.
J Brad Karpinka, Joshua D Fortriede, Kevin A Burns, Christina James-Zorn, Virgilio G Ponferrada

Nucleic Acids Res· January 2015

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Enhanced XAO: the ontology of Xenopus anatomy and development underpins more accurate annotation of gene expression and queries on Xenbase.
Erik Segerdell, Virgilio G Ponferrada, Christina James-Zorn, Kevin A Burns, Joshua D Fortriede

J Biomed Semantics· October 2013

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