Publications by authors named "Joshua Moller"

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A high-throughput platform for biophysical antibody developability assessment to enable AI/ML model training.
Ammar Arsiwala, Rebecca Bhatt, Lood van Niekerk, Porfirio Quintero-Cadena, Xiang Ao, Joshua Moller

MAbs· December 2025

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ProT-VAE: Protein Transformer Variational AutoEncoder for functional protein design.
Emre Sevgen, Joshua Moller, Adrian Lange, John Parker, Sean Quigley

Proc Natl Acad Sci U S A· October 2025

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Tetranucleosome Interactions Drive Chromatin Folding.
Walter Alvarado, Joshua Moller, Andrew L Ferguson, Juan J de Pablo

ACS Cent Sci· June 2021

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OpenAWSEM with Open3SPN2: A fast, flexible, and accessible framework for large-scale coarse-grained biomolecular simulations.
Wei Lu, Carlos Bueno, Nicholas P Schafer, Joshua Moller, Shikai Jin

PLoS Comput Biol· February 2021

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Bottom-Up Meets Top-Down: The Crossroads of Multiscale Chromatin Modeling.
Joshua Moller, Juan J de Pablo

Biophys J· May 2020

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1CPN: A coarse-grained multi-scale model of chromatin.
Joshua Lequieu, Andrés Córdoba, Joshua Moller, Juan J de Pablo

J Chem Phys· June 2019

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The Free Energy Landscape of Internucleosome Interactions and Its Relation to Chromatin Fiber Structure.
Joshua Moller, Joshua Lequieu, Juan J de Pablo

ACS Cent Sci· February 2019

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SSAGES: Software Suite for Advanced General Ensemble Simulations.
Hythem Sidky, Yamil J Colón, Julian Helfferich, Benjamin J Sikora, Cody Bezik, Joshua Moller

J Chem Phys· January 2018

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