Publications by authors named "Julio Aires"

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Commensal Clostridia in the preterm gut as reservoirs of antimicrobial resistance: susceptibility profiles, and resistance genes.
Johanne Delannoy, Laurent Ferraris, Chantal Labellie, Léa Dupire, Denissa Ilavska, Julio Aires

FEMS Microbiol Ecol· December 2025

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Whole-genome sequencing-based typing methods for strains from clinical, animal, plant, and environmental sources.
Nadim Cassir, Victoria Mesa, Laurent Ferraris, Johanne Delannoy, Yousra Mikrat, Julio Aires

Microbiol Spectr· December 2025

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Very preterm gut microbiota development from the first week of life to 3.5 years of age: a prospective longitudinal multicenter study.
Gaël Toubon, Constance Patin, Johanne Delannoy, Jean-Christophe Rozé, Frédéric Barbut, Julio Aires

Microbiol Spectr· April 2025

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Association between gut microbiota at 3.5 years of age and body mass index at 5 years: results from two French nationwide birth cohorts.
Gaël Toubon, Marie-José Butel, Jean-Christophe Rozé, Johanne Delannoy, Pierre-Yves Ancel, Julio Aires

Int J Obes (Lond)· April 2024

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Clostridium neonatale antimicrobial susceptibility, genetic resistance determinants, and genotyping: a multicentre spatiotemporal retrospective analysis.
Laurent Ferraris, Johanne Delannoy, Christelle Mazuet, Laure Diancourt, Victoria Mesa-Schein, Julio Aires

J Antimicrob Chemother· February 2024

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Core-genome multilocus sequence typing and core-SNP analysis of strains isolated in different spatio-temporal settings.
Victoria Mesa, Johanne Delannoy, Laurent Ferraris, Laure Diancourt, Christelle Mazuet, Julio Aires

Microbiol Spectr· December 2023

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Occurrence of Neonatal Necrotizing Enterocolitis in Premature Neonates and Gut Microbiota: A Case-Control Prospective Multicenter Study.
Julio Aires, Zehra Esra Ilhan, Lancelot Nicolas, Laurent Ferraris, Johanne Delannoy

Microorganisms· September 2023

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Early Life Factors Influencing Children Gut Microbiota at 3.5 Years from Two French Birth Cohorts.
Gaël Toubon, Marie-José Butel, Jean-Christophe Rozé, Ioannis Nicolis, Johanne Delannoy, Julio Aires

Microorganisms· May 2023

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Neonatal necrotizing enterocolitis: and fermentation metabolism and enteropathogenicity.
Laurent Ferraris, Aurélie Balvay, Deborah Bellet, Johanne Delannoy, Claire Maudet, Julio Aires

Gut Microbes· February 2023

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Gut Microbiota Diversity of Preterm Neonates Is Associated With Colonization.
Jeanne Couturier, Patricia Lepage, Sarah Jolivet, Johanne Delannoy, Victoria Mesa, Julio Aires

Front Cell Infect Microbiol· July 2022

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Very Preterm Children Gut Microbiota Comparison at the Neonatal Period of 1 Month and 3.5 Years of Life.
Gaël Toubon, Marie-José Butel, Jean-Christophe Rozé, Patricia Lepage, Johanne Delannoy, Julio Aires

Front Microbiol· July 2022

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Core-, pan- and accessory genome analyses of : insights into genetic diversity.
Victoria Mesa, Marc Monot, Laurent Ferraris, Michel Popoff, Christelle Mazuet, Julio Aires

Microb Genom· May 2022

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Isolation and Characterization of Commensal Bifidobacteria Strains in Gut Microbiota of Neonates Born Preterm: A Prospective Longitudinal Study.
Sandra Wydau-Dematteis, Johanne Delannoy, Anne-Claire Téolis, Agnès Giuseppi, Florence Campeotto, Julio Aires

Microorganisms· March 2022

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First 1000 Days of Life: Consequences of Antibiotics on Gut Microbiota.
Julio Aires

Front Microbiol· May 2021

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Characterization of Non-Toxigenic Strains Isolated from Preterm Neonates and In Vivo Study of Their Protective Effect.
Jeanne Couturier, Léa Franconeri, Claire Janoir, Laurent Ferraris, Rabab Syed-Zaidi, Julio Aires

J Clin Med· November 2020

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Assessment of Neonatal Intensive Care Unit Practices and Preterm Newborn Gut Microbiota and 2-Year Neurodevelopmental Outcomes.
Jean-Christophe Rozé, Pierre-Yves Ancel, Laetitia Marchand-Martin, Clotilde Rousseau, Emmanuel Montassier, Julio Aires

JAMA Netw Open· September 2020

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Carriage and colonization of C. difficile in preterm neonates: A longitudinal prospective study.
Laurent Ferraris, Jeanne Couturier, Catherine Eckert, Johanne Delannoy, Frédéric Barbut, Julio Aires

PLoS One· November 2019

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Clostridial Strain-Specific Characteristics Associated with Necrotizing Enterocolitis.
Sophia Schönherr-Hellec, Geraldine L Klein, Johanne Delannoy, Laurent Ferraris, Jean Christophe Rozé, Julio Aires

Appl Environ Microbiol· April 2018

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Nutritional strategies and gut microbiota composition as risk factors for necrotizing enterocolitis in very-preterm infants.
Jean-Christophe Rozé, Pierre-Yves Ancel, Patricia Lepage, Laetitia Martin-Marchand, Ziad Al Nabhani, Julio Aires

Am J Clin Nutr· September 2017

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One-Step Multiplex PCR Assay for Differentiating Proposed New Species "Clostridium neonatale" from Closely Related Species.
Laurent Ferraris, Sophia Schönherr, Philippe Bouvet, Brunhilde Dauphin, Michel Popoff, Julio Aires

J Clin Microbiol· November 2015

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Editorial Commentary: Neonatal Necrotizing Enterocolitis: A Clostridial Disease?
Marie-José Butel, Julio Aires

Clin Infect Dis· October 2015

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16S rRNA gene sequencing, multilocus sequence analysis, and mass spectrometry identification of the proposed new species "Clostridium neonatale".
Philippe Bouvet, Laurent Ferraris, Brunhilde Dauphin, Michel-Robert Popoff, Marie Jose Butel, Julio Aires

J Clin Microbiol· December 2014

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Bifidobacterium longum and Bifidobacterium breve isolates from preterm and full term neonates: comparison of cell surface properties.
Valérie Andriantsoanirina, Anne-Claire Teolis, Liu Xin Xin, Marie Jose Butel, Julio Aires

Anaerobe· August 2014

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Tolerance of Bifidobacterium human isolates to bile, acid and oxygen.
Valérie Andriantsoanirina, Solène Allano, Marie José Butel, Julio Aires

Anaerobe· June 2013

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Clostridia in premature neonates' gut: incidence, antibiotic susceptibility, and perinatal determinants influencing colonization.
Laurent Ferraris, Marie José Butel, Florence Campeotto, Michel Vodovar, Jean Christophe Rozé, Julio Aires

PLoS One· June 2012

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