Publications by authors named "Jun Inamo"

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CellPhenoX: An Explainable Machine Learning Method for Identifying Cell Phenotypes To Predict Clinical Outcomes from Single-Cell Multi-Omics.
Jade Young, Jun Inamo, Zachary Caterer, Revanth Krishna, Fan Zhang

Adv Sci (Weinh)· November 2025

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Spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis.
Jun Inamo, Roselyn Fierkens, Michael R Clay, Anna Helena Jonsson, Clara Lin

JCI Insight· November 2025

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Comparative single-cell and spatial profiling of anti-SSA-positive and anti-centromere-positive Sjögren's disease reveals common and distinct immune activation and fibroblast-mediated inflammation.
Jun Inamo, Masaru Takeshita, Katsuya Suzuki, Kazuyuki Tsunoda, Satoshi Usuda

Nat Commun· September 2025

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Blood immunophenotyping identifies distinct kidney histopathology and outcomes in patients with lupus nephritis.
Alice Horisberger, Alec Griffith, Joshua Keegan, Arnon Arazi, John Pulford, Jun Inamo

J Clin Invest· August 2025

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Subcellular spatial transcriptomics reveals immune-stromal crosstalk within the synovium of patients with juvenile idiopathic arthritis.
Jun Inamo, Roselyn Fierkens, Michael R CLay, Anna Helena Jonsson, Clara Lin

medRxiv· August 2025

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Deep immunophenotyping reveals circulating activated lymphocytes in individuals at risk for rheumatoid arthritis.
Jun Inamo, Joshua Keegan, Alec Griffith, Tusharkanti Ghosh, Alice Horisberger

J Clin Invest· March 2025

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CellPhenoX: An eXplainable Cell-specific machine learning method to predict clinical Phenotypes using single-cell multi-omics.
Jade Young, Jun Inamo, Zachary Caterer, Revanth Krishna, Fan Zhang

bioRxiv· January 2025

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Evaluating methods for integrating single-cell data and genetics to understand inflammatory disease complexity.
Hope A Townsend, Kaylee J Rosenberger, Lauren A Vanderlinden, Jun Inamo, Fan Zhang

Front Immunol· December 2024

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Functional and dynamic profiling of transcript isoforms reveals essential roles of alternative splicing in interferon response.
Mahoko Takahashi Ueda, Jun Inamo, Fuyuki Miya, Mihoko Shimada, Kensuke Yamaguchi

Cell Genom· October 2024

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Long-read sequencing for 29 immune cell subsets reveals disease-linked isoforms.
Jun Inamo, Akari Suzuki, Mahoko Takahashi Ueda, Kensuke Yamaguchi, Hiroshi Nishida

Nat Commun· May 2024

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Blood immunophenotyping identifies distinct kidney histopathology and outcomes in patients with lupus nephritis.
Alice Horisberger, Alec Griffith, Joshua Keegan, Arnon Arazi, John Pulford, Jun Inamo

bioRxiv· March 2024

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Uncovering the Localization and Function of a Novel Read-Through Transcript ''.
Shichen Chang, Satoru Torii, Jun Inamo, Kinya Ishikawa, Yuta Kochi

Cells· December 2023

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Expression of the readthrough transcript CiDRE in alveolar macrophages boosts SARS-CoV-2 susceptibility and promotes COVID-19 severity.
Yuichi Mitsui, Tatsuya Suzuki, Kanako Kuniyoshi, Jun Inamo, Kensuke Yamaguchi

Immunity· August 2023

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Deep immunophenotyping reveals circulating activated lymphocytes in individuals at risk for rheumatoid arthritis.
Jun Inamo, Joshua Keegan, Alec Griffith, Tusharkanti Ghosh, Alice Horisberger

bioRxiv· July 2023

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Single-cell computational machine learning approaches to immune-mediated inflammatory disease: New tools uncover novel fibroblast and macrophage interactions driving pathogenesis.
Douglas Fritz, Jun Inamo, Fan Zhang

Front Immunol· January 2023

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High serum IgA and activated Th17 and Treg predict the efficacy of abatacept in patients with early, seropositive rheumatoid arthritis.
Jun Inamo, Yuko Kaneko, Jun Kikuchi, Tsutomu Takeuchi

Clin Rheumatol· September 2021

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Molecular remission at T cell level in patients with rheumatoid arthritis.
Jun Inamo, Katsuya Suzuki, Masaru Takeshita, Yasushi Kondo, Yuumi Okuzono

Sci Rep· August 2021

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Distinct Expression of Coinhibitory Molecules on Alveolar T Cells in Patients With Rheumatoid Arthritis-Associated and Idiopathic Inflammatory Myopathy-Associated Interstitial Lung Disease.
Maho Nakazawa, Katsuya Suzuki, Masaru Takeshita, Jun Inamo, Hirofumi Kamata

Arthritis Rheumatol· April 2021

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Is type 2 diabetes mellitus an inverse risk factor for the development of rheumatoid arthritis?
Jun Inamo, Yuta Kochi, Tsutomu Takeuchi

J Hum Genet· February 2021

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Association of differentially expressed genes and autoantibody type in patients with systemic sclerosis.
Jun Inamo

Rheumatology (Oxford)· February 2021

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Distinct gene network in skin lesion of patients with diffuse cutaneous systemic sclerosis.
Jun Inamo

Clin Rheumatol· October 2020

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Association between celiac disease and systemic lupus erythematosus: a Mendelian randomization study.
Jun Inamo

Rheumatology (Oxford)· September 2020

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How should we overcome the threat by the pandemic of 2019-nCoV? Epidemic simulation using the SIRS model.
Jun Inamo

Clin Rheumatol· August 2020

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T peripheral helper cells signature genes in patients with rheumatoid arthritis.
Jun Inamo

Clin Rheumatol· June 2020

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Identification of novel genes associated with dysregulation of B cells in patients with primary Sjögren's syndrome.
Jun Inamo, Katsuya Suzuki, Masaru Takeshita, Yoshiaki Kassai, Maiko Takiguchi

Arthritis Res Ther· June 2020

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