Publications by authors named "Justin Pachebat"

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Investigating within-host population diversity of Cryptosporidium parvum using BlooMine.
Arthur V Morris, Thomas Connor, Justin Pachebat, Martin Swain

BMC Genomics· November 2025

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Correction to: Microbiomes attached to fresh perennial ryegrass are temporally resilient and adapt to changing ecological niches.
Sharon A Huws, Joan E Edwards, Wanchang Lin, Francesco Rubino, Mark Alston, Justin Pachebat

Microbiome· August 2021

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Microbiomes attached to fresh perennial ryegrass are temporally resilient and adapt to changing ecological niches.
Sharon A Huws, Joan E Edwards, Wanchang Lin, Francesco Rubino, Mark Alston, Justin Pachebat

Microbiome· June 2021

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The Isolation and Genome Sequencing of Five Novel Bacteriophages From the Rumen Active Against .
Jessica C A Friedersdorff, Alison H Kingston-Smith, Justin A Pachebat, Alan R Cookson, David Rooke

Front Microbiol· July 2020

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Domestication of Campylobacter jejuni NCTC 11168.
Ben Pascoe, Lisa K Williams, Jessica K Calland, Guillaume Meric, Matthew D Hitchings, Justin A Pachebat

Microb Genom· July 2019

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Evolutionary genomics of anthroponosis in Cryptosporidium.
Johanna L Nader, Thomas C Mathers, Ben J Ward, Justin A Pachebat, Martin T Swain

Nat Microbiol· May 2019

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Genomic analysis of bacteria in the Acute Oak Decline pathobiome.
James Doonan, Sandra Denman, Justin A Pachebat, James E McDonald

Microb Genom· January 2019

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A pilot study using metagenomic sequencing of the sputum microbiome suggests potential bacterial biomarkers for lung cancer.
Simon J S Cameron, Keir E Lewis, Sharon A Huws, Matthew J Hegarty, Paul D Lewis, Justin A Pachebat

PLoS One· September 2017

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Metagenomic Sequencing of the Chronic Obstructive Pulmonary Disease Upper Bronchial Tract Microbiome Reveals Functional Changes Associated with Disease Severity.
Simon J S Cameron, Keir E Lewis, Sharon A Huws, Wanchang Lin, Matthew J Hegarty, Justin A Pachebat

PLoS One· July 2016

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Seasonal immunoregulation in a naturally-occurring vertebrate.
Martha Brown, Pascal Hablützel, Ida M Friberg, Anna G Thomason, Alexander Stewart, Justin A Pachebat

BMC Genomics· May 2016

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Terminator Operon Reporter: combining a transcription termination switch with reporter technology for improved gene synthesis and synthetic biology applications.
Massimiliano Zampini, Luis A J Mur, Pauline Rees Stevens, Justin A Pachebat, C James Newbold

Sci Rep· May 2016

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C4 Photosynthesis in the Rice Paddy: Insights from the Noxious Weed Echinochloa glabrescens.
Sarah Covshoff, Marek Szecowka, Thomas E Hughes, Richard Smith-Unna, Steven Kelly, Justin A Pachebat

Plant Physiol· January 2016

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Temporal dynamics of the metabolically active rumen bacteria colonizing fresh perennial ryegrass.
Sharon A Huws, Joan E Edwards, Christopher J Creevey, Pauline Rees Stevens, Wanchang Lin, Justin A Pachebat

FEMS Microbiol Ecol· January 2016

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Draft Genome Sequence of Probiotic Enterococcus faecium Strain L-3.
Alena Karaseva, Anna Tsapieva, Justin Pachebat, Alexander Suvorov

Genome Announc· January 2016

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Generation of whole genome sequences of new Cryptosporidium hominis and Cryptosporidium parvum isolates directly from stool samples.
Stephen J Hadfield, Justin A Pachebat, Martin T Swain, Guy Robinson, Simon Js Cameron

BMC Genomics· August 2015

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Draft Genomes, Phylogenetic Reconstruction, and Comparative Genomics of Two Novel Cohabiting Bacterial Symbionts Isolated from Frankliniella occidentalis.
Paul D Facey, Guillaume Méric, Matthew D Hitchings, Justin A Pachebat, Matt J Hegarty

Genome Biol Evol· July 2015

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RapGene: a fast and accurate strategy for synthetic gene assembly in Escherichia coli.
Massimiliano Zampini, Pauline Rees Stevens, Justin A Pachebat, Alison Kingston-Smith, Luis A J Mur

Sci Rep· June 2015

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Neurofibromin controls macropinocytosis and phagocytosis in Dictyostelium.
Gareth Bloomfield, David Traynor, Sophia P Sander, Douwe M Veltman, Justin A Pachebat

Elife· March 2015

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Coupled cryoconite ecosystem structure-function relationships are revealed by comparing bacterial communities in alpine and Arctic glaciers.
Arwyn Edwards, Luis A J Mur, Susan E Girdwood, Alexandre M Anesio, Marek Stibal, Justin A Pachebat

FEMS Microbiol Ecol· August 2014

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The dynamic bacterial communities of a melting High Arctic glacier snowpack.
Katherina Hell, Arwyn Edwards, Jakub Zarsky, Sabine M Podmirseg, Susan Girdwood, Justin A Pachebat

ISME J· September 2013

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Draft Genome Sequence of Rhodococcus rhodnii Strain LMG5362, a Symbiont of Rhodnius prolixus (Hemiptera, Reduviidae, Triatominae), the Principle Vector of Trypanosoma cruzi.
Justin A Pachebat, Geertje van Keulen, Miranda M A Whitten, Susan Girdwood, Ricardo Del Sol

Genome Announc· June 2013

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A comparison of the microbiome and the metabolome of different regions of the equine hindgut.
Kirsty Dougal, Patricia A Harris, Arwyn Edwards, Justin A Pachebat, Tina M Blackmore

FEMS Microbiol Ecol· December 2012

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Extensive proteolytic processing of the malaria parasite merozoite surface protein 7 during biosynthesis and parasite release from erythrocytes.
Justin A Pachebat, Madhusudan Kadekoppala, Munira Grainger, Anton R Dluzewski, Ruwani S Gunaratne

Mol Biochem Parasitol· January 2007

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Sequence and analysis of chromosome 2 of Dictyostelium discoideum.
Gernot Glöckner, Ludwig Eichinger, Karol Szafranski, Justin A Pachebat, Alan T Bankier

Nature· July 2002

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