Publications by authors named "Kady D Waggle"

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Genomic epidemiology of healthcare-associated respiratory virus infections in Pittsburgh, Pennsylvania, 2018-2020.
Vatsala Rangachar Srinivasa, Marissa P Griffith, Alexander J Sundermann, Emma Mills, Nathan J Raabe, Kady D Waggle

Infect Control Hosp Epidemiol· November 2025

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ACCIO: An Assembly-Based Tool Enabling Plasmid Detection.
Nathan J Raabe, Marissa P Griffith, Vatsala Rangachar Srinivasa, Kady D Waggle, Alexander J Sundermann

medRxiv· November 2025

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Enhanced discrimination of transmission using whole-genome sequencing and multi-locus variable number tandem repeat analysis.
Alexander J Sundermann, Emma G Mills, Vatsala Rangachar Srinivasa, Marissa P Griffith, Deena Ereifej, Kady D Waggle

Microbiol Spectr· October 2025

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Methods for cost-efficient, whole genome sequencing surveillance for enhanced detection of outbreaks in a hospital setting.
Kady D Waggle, Marissa Pacey Griffith, Alecia B Rokes, Vatsala Rangachar Srinivasa, Erin M Nawrocki

medRxiv· October 2025

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Whole Genome Sequencing to Study SARS-CoV-2 Transmission between University Students and the Surrounding Community in Pittsburgh, Pennsylvania, 2020-2021.
Vatsala Rangachar Srinivasa, Marissa P Griffith, Kathleen A Shutt, Hunter Coyle, Nathan J Raabe, Kady D Waggle

medRxiv· October 2025

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Emergence and Epidemiology of Dominant Variants of Human Metapneumovirus in the United States between 2016 and 2021.
Lora Lee Pless, Lambodar Damodaran, Ray Pomponio, Rose Patrick, Marissa Pacey Griffith, Kady D Waggle

medRxiv· September 2025

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Genomic sequencing surveillance of patients colonized with vancomycin-resistant enterococci improves detection of healthcare-associated transmission.
Alexander J Sundermann, Vatsala Rangachar Srinivasa, Emma G Mills, Marissa P Griffith, Eric Evans, Kady D Waggle

BMC Glob Public Health· August 2025

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Transmission of group A Streptococcus in long-term care: An outbreak investigation.
Theresa Murillo, Krishnendu Mangal, Gabrielle Barmada, Tracy Morris, Kady D Waggle

Am J Infect Control· April 2025

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Real-Time Genomic Surveillance for Enhanced Healthcare Outbreak Detection and Control: Clinical and Economic Impact.
Alexander J Sundermann, Praveen Kumar, Marissa P Griffith, Kady D Waggle, Vatsala Rangachar Srinivasa

Clin Infect Dis· April 2025

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Genomic Epidemiology of Healthcare-Associated Respiratory Virus Infections.
Vatsala Rangachar Srinivasa, Marissa P Griffith, Alexander J Sundermann, Emma Mills, Nathan J Raabe, Kady D Waggle

medRxiv· April 2025

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Genomic Surveillance for Enhanced Healthcare Outbreak Detection and Control.
Alexander J Sundermann, Praveen Kumar, Marissa P Griffith, Kady D Waggle, Vatsala Rangachar Srinivasa

medRxiv· September 2024

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Genomic sequencing surveillance of patients colonized with vancomycin-resistant (VRE) improves detection of hospital-associated transmission.
Alexander J Sundermann, Vatsala Rangachar Srinivasa, Emma G Mills, Marissa P Griffith, Eric Evans, Kady D Waggle

medRxiv· May 2024

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Two Artificial Tears Outbreak-Associated Cases of Extensively Drug-Resistant Pseudomonas aeruginosa Detected Through Whole Genome Sequencing-Based Surveillance.
Alexander J Sundermann, Vatsala Rangachar Srinivasa, Emma G Mills, Marissa P Griffith, Kady D Waggle

J Infect Dis· February 2024

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Genomic Epidemiology of Severe Acute Respiratory Syndrome Coronavirus 2 Transmission Among University Students in Western Pennsylvania.
Vatsala Rangachar Srinivasa, Marissa P Griffith, Kady D Waggle, Monika Johnson, Lei Zhu

J Infect Dis· June 2023

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Two artificial tears outbreak-associated cases of XDR detected through whole genome sequencing-based surveillance.
Alexander J Sundermann, Vatsala Rangachar Srinivasa, Emma G Mills, Marissa P Griffith, Kady D Waggle

medRxiv· April 2023

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Genomic characterization of SARS-CoV-2 from vaccine breakthrough cases in Allegheny County, Pennsylvania.
Kady D Waggle, Marissa P Griffith, Lei Zhu, Vaughn S Cooper, Daniel J Snyder

PLoS One· September 2022

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