Publications by authors named "Karin Deal"

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Aegilops tauschii genome assembly v6.0 with improved sequence contiguity differentiates assembly errors from genuine differences with the D subgenome of Chinese Spring wheat assembly IWGSC RefSeq v2.1.
Rukmangada Maratikyathanahalli Srikanta, Le Wang, Tingting Zhu, Karin R Deal, Naxin Huo

G3 (Bethesda)· May 2025

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Aegilops tauschii genome assembly Aet v5.0 features greater sequence contiguity and improved annotation.
Le Wang, Tingting Zhu, Juan C Rodriguez, Karin R Deal, Jorge Dubcovsky

G3 (Bethesda)· December 2021

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Optical maps refine the bread wheat Triticum aestivum cv. Chinese Spring genome assembly.
Tingting Zhu, Le Wang, Hélène Rimbert, Juan C Rodriguez, Karin R Deal

Plant J· July 2021

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A rare single nucleotide variant in Pm5e confers powdery mildew resistance in common wheat.
Jingzhong Xie, Guanghao Guo, Yong Wang, Tiezhu Hu, Lili Wang, Karin R Deal

New Phytol· November 2020

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Computational Identification and Comparative Analysis of Conserved miRNAs and Their Putative Target Genes in the and Genomes.
Le Wang, Tingting Zhu, Karin R Deal, Jan Dvorak, Ming-Cheng Luo

Plants (Basel)· October 2020

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Introgression of perennial growth habit from Lophopyrum elongatum into wheat.
Juliya Abbasi, Jiale Xu, Hamid Dehghani, Ming-Cheng Luo, Karin R Deal

Theor Appl Genet· September 2020

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Genome-wide introgression from a bread wheat × Lophopyrum elongatum amphiploid into wheat.
Jiale Xu, Le Wang, Karin R Deal, Tingting Zhu, Ramesh K Ramasamy

Theor Appl Genet· April 2020

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A rare gain of function mutation in a wheat tandem kinase confers resistance to powdery mildew.
Ping Lu, Li Guo, Zhenzhong Wang, Beibei Li, Jing Li, Karin R Deal

Nat Commun· February 2020

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Improved Genome Sequence of Wild Emmer Wheat Zavitan with the Aid of Optical Maps.
Tingting Zhu, Le Wang, Juan C Rodriguez, Karin R Deal, Raz Avni

G3 (Bethesda)· March 2019

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Sequencing a  ×  hybrid yields high-quality genome assemblies of parental species.
Tingting Zhu, Le Wang, Frank M You, Juan C Rodriguez, Karin R Deal

Hortic Res· March 2019

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Reassessment of the evolution of wheat chromosomes 4A, 5A, and 7B.
Jan Dvorak, Le Wang, Tingting Zhu, Chad M Jorgensen, Ming-Cheng Luo, Karin R Deal

Theor Appl Genet· November 2018

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Structural variation and rates of genome evolution in the grass family seen through comparison of sequences of genomes greatly differing in size.
Jan Dvorak, Le Wang, Tingting Zhu, Chad M Jorgensen, Karin R Deal

Plant J· August 2018

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Analysis of Brachypodium genomes with genome-wide optical maps.
Tingting Zhu, Zhaorong Hu, Juan C Rodriguez, Karin R Deal, Jan Dvorak

Genome· August 2018

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Introgression of the Suppressor into Wheat.
Hao Li, Karin R Deal, Ming-Cheng Luo, Wanquan Ji, Assaf Distelfeld

Front Plant Sci· December 2017

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Genome sequence of the progenitor of the wheat D genome Aegilops tauschii.
Ming-Cheng Luo, Yong Q Gu, Daniela Puiu, Hao Wang, Sven O Twardziok, Karin R Deal

Nature· November 2017

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Optical Nano-mapping and Analysis of Plant Genomes.
Ming-Cheng Luo, Karin R Deal, Armond Murray, Tingting Zhu, Alex R Hastie

Methods Mol Biol· October 2017

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Sequencing and comparative analyses of Aegilops tauschii chromosome arm 3DS reveal rapid evolution of Triticeae genomes.
Jingzhong Xie, Naxin Huo, Shenghui Zhou, Yi Wang, Guanghao Guo, Karin R Deal

J Genet Genomics· January 2017

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Rapid evolutionary dynamics in a 2.8-Mb chromosomal region containing multiple prolamin and resistance gene families in Aegilops tauschii.
Lingli Dong, Naxin Huo, Yi Wang, Karin Deal, Daowen Wang

Plant J· September 2016

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Identification of a robust molecular marker for the detection of the stem rust resistance gene Sr45 in common wheat.
Sambasivam Periyannan, Urmil Bansal, Harbans Bariana, Karin Deal, Ming-Cheng Luo

Theor Appl Genet· April 2014

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Rapid genome mapping in nanochannel arrays for highly complete and accurate de novo sequence assembly of the complex Aegilops tauschii genome.
Alex R Hastie, Lingli Dong, Alexis Smith, Jeff Finklestein, Ernest T Lam, Karin R Deal

PLoS One· August 2013

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The gene Sr33, an ortholog of barley Mla genes, encodes resistance to wheat stem rust race Ug99.
Sambasivam Periyannan, John Moore, Michael Ayliffe, Urmil Bansal, Xiaojing Wang, Karin Deal

Science· August 2013

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Insular organization of gene space in grass genomes.
Andrea Gottlieb, Hans-Georg Müller, Alicia N Massa, Humphrey Wanjugi, Karin R Deal

PLoS One· July 2013

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A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor.
Ming-Cheng Luo, Yong Q Gu, Frank M You, Karin R Deal, Yaqin Ma

Proc Natl Acad Sci U S A· May 2013

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Exploring the diploid wheat ancestral A genome through sequence comparison at the high-molecular-weight glutenin locus region.
Lingli Dong, Naxin Huo, Yi Wang, Karin Deal, Ming-Cheng Luo

Mol Genet Genomics· December 2012

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Genome-wide SNP discovery in walnut with an AGSNP pipeline updated for SNP discovery in allogamous organisms.
Frank M You, Karin R Deal, Jirui Wang, Monica T Britton, Joseph N Fass

BMC Genomics· July 2012

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