Publications by authors named "Katja Petzold"

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Fibrillarin-dependent 2'-O-methylation modulates RPS28 ribosome incorporation and oncogenic translation.
Paula Groza, Kanchan Kumari, Margalida Esteva-Socias, Johanna Schott, Devi Prasad Bhattarai, Katja Petzold

Cancer Lett· November 2025

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Sequence, structure, and affinity of miR-34a binding sites determine repression efficacy.
Lara Sweetapple, David M Kosek, Elnaz Banijamali, Walter Becker, Juliane Müller, Katja Petzold

Nucleic Acids Res· July 2025

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Mapping effective microRNA pairing beyond the seed using abasic modifications.
David M Kosek, Katja Petzold, Emma R Andersson

Nucleic Acids Res· April 2025

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Investigating Interaction Dynamics of an Enantioselective Peptide-Catalyzed Acylation Reaction.
Matthias Brauser, Katja Petzold, Christina M Thiele

Angew Chem Int Ed Engl· March 2025

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Optimising in-cell NMR acquisition for nucleic acids.
Henry T P Annecke, Reiner Eidelpes, Hannes Feyrer, Julian Ilgen, Cenk Onur Gürdap, Katja Petzold

J Biomol NMR· December 2024

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NanoBiT- and NanoBiT/BRET-based assays allow the analysis of binding kinetics of Wnt-3a to endogenous Frizzled 7 in a colorectal cancer model.
Lukas Grätz, Joanna J Sajkowska-Kozielewicz, Janine Wesslowski, Julia Kinsolving, Lloyd J Bridge, Katja Petzold

Br J Pharmacol· October 2024

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Elucidating microRNA-34a organisation within human Argonaute-2 by dynamic nuclear polarisation-enhanced magic angle spinning NMR.
Rubin Dasgupta, Walter Becker, Katja Petzold

Nucleic Acids Res· October 2024

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Efficient 3'-pairing renders microRNA targeting less sensitive to mRNA seed accessibility.
David M Kosek, Elnaz Banijamali, Walter Becker, Katja Petzold, Emma R Andersson

Nucleic Acids Res· November 2023

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Mass Spectrometry of RNA-Binding Proteins during Liquid-Liquid Phase Separation Reveals Distinct Assembly Mechanisms and Droplet Architectures.
Cagla Sahin, Aikaterini Motso, Xinyu Gu, Hannes Feyrer, Dilraj Lama, Katja Petzold

J Am Chem Soc· May 2023

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RNA:RNA interaction in ternary complexes resolved by chemical probing.
Elnaz Banijamali, Lorenzo Baronti, Walter Becker, Joanna J Sajkowska-Kozielewicz, Ting Huang, Katja Petzold

RNA· March 2023

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ANGEL2 phosphatase activity is required for non-canonical mitochondrial RNA processing.
Paula Clemente, Javier Calvo-Garrido, Sarah F Pearce, Florian A Schober, Megumi Shigematsu, Katja Petzold

Nat Commun· September 2022

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Enzymatic incorporation of an isotope-labeled adenine into RNA for the study of conformational dynamics by NMR.
Hannes Feyrer, Cenk Onur Gurdap, Maja Marušič, Judith Schlagnitweit, Katja Petzold

PLoS One· July 2022

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Mutate-and-chemical-shift-fingerprint (MCSF) to characterize excited states in RNA using NMR spectroscopy.
Magdalena Riad, Noah Hopkins, Lorenzo Baronti, Hampus Karlsson, Judith Schlagnitweit, Katja Petzold

Nat Protoc· November 2021

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Correction to 'Secondary structure determination of conserved SARS-CoV-2 RNA elements by NMR spectroscopy'.
Anna Wacker, Julia E Weigand, Sabine R Akabayov, Nadide Altincekic, Jasleen Kaur Bains, Katja Petzold

Nucleic Acids Res· July 2021

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Practical Aspects of Sample Preparation and Setup of 1H R1ρ Relaxation Dispersion Experiments of RNA.
Hannes Feyrer, Judith Schlagnitweit, Katja Petzold

J Vis Exp· July 2021

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Production of Structured RNA Fragments by In Vitro Transcription and HPLC Purification.
Hampus Karlsson, Hannes Feyrer, Lorenzo Baronti, Katja Petzold

Curr Protoc· June 2021

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H, C and N chemical shift assignment of the stem-loop 5a from the 5'-UTR of SARS-CoV-2.
Robbin Schnieders, Stephen A Peter, Elnaz Banijamali, Magdalena Riad, Nadide Altincekic, Katja Petzold

Biomol NMR Assign· April 2021

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Secondary structure determination of conserved SARS-CoV-2 RNA elements by NMR spectroscopy.
Anna Wacker, Julia E Weigand, Sabine R Akabayov, Nadide Altincekic, Jasleen Kaur Bains, Katja Petzold

Nucleic Acids Res· December 2020

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A robust and versatile method for production and purification of large-scale RNA samples for structural biology.
Hampus Karlsson, Lorenzo Baronti, Katja Petzold

RNA· August 2020

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Base-pair conformational switch modulates miR-34a targeting of Sirt1 mRNA.
Lorenzo Baronti, Ileana Guzzetti, Parisa Ebrahimi, Sarah Friebe Sandoz, Emilie Steiner, Katja Petzold

Nature· July 2020

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One-Pot Production of RNA in High Yield and Purity Through Cleaving Tandem Transcripts.
Hannes Feyrer, Raluca Munteanu, Lorenzo Baronti, Katja Petzold

Molecules· March 2020

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RNA Dynamics by NMR Spectroscopy.
Maja Marušič, Judith Schlagnitweit, Katja Petzold

Chembiochem· November 2019

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Observing an Antisense Drug Complex in Intact Human Cells by in-Cell NMR Spectroscopy.
Judith Schlagnitweit, Sarah Friebe Sandoz, Aleksander Jaworski, Ileana Guzzetti, Fabien Aussenac, Katja Petzold

Chembiochem· October 2019

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A two-dimensional replica-exchange molecular dynamics method for simulating RNA folding using sparse experimental restraints.
Parisa Ebrahimi, Simi Kaur, Lorenzo Baronti, Katja Petzold, Alan A Chen

Methods· June 2019

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A guide to large-scale RNA sample preparation.
Lorenzo Baronti, Hampus Karlsson, Maja Marušič, Katja Petzold

Anal Bioanal Chem· May 2018

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