Publications by authors named "Keith Simmon"

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Clinical validation of a real-time machine learning-based system for the detection of acute myeloid leukemia by flow cytometry.
Lauren M Zuromski, Jacob Durtschi, Aimal Aziz, Jeffrey Chumley, Mark Dewey, Keith Simmon

Cytometry B Clin Cytom· September 2025

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Development and validation of a next-generation sequencing assay with open-access analysis software for detecting resistance-associated mutations in CMV.
Melanie A Mallory, Weston C Hymas, Keith E Simmon, Michael T Pyne, Jeffery B Stevenson

J Clin Microbiol· December 2023

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HIV-1 Drug Resistance Assay Using Ion Torrent Next Generation Sequencing and On-Instrument End-to-End Analysis Software.
Michael T Pyne, Keith E Simmon, Melanie A Mallory, Weston C Hymas, Jeffery Stevenson

J Clin Microbiol· July 2022

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Mycobacterium grossiae sp. nov., a rapidly growing, scotochromogenic species isolated from human clinical respiratory and blood culture specimens.
Alberto Enrique Paniz-Mondolfi, Alexander L Greninger, Lynn Ladutko, Barbara A Brown-Elliott, Ravikiran Vasireddy, Keith E Simmon

Int J Syst Evol Microbiol· November 2017

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Human Bocavirus Capsid Messenger RNA Detection in Children With Pneumonia.
Robert Schlaberg, Krow Ampofo, Keith D Tardif, Chris Stockmann, Keith E Simmon

J Infect Dis· September 2017

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Viral Pathogen Detection by Metagenomics and Pan-Viral Group Polymerase Chain Reaction in Children With Pneumonia Lacking Identifiable Etiology.
Robert Schlaberg, Krista Queen, Keith Simmon, Keith Tardif, Chris Stockmann

J Infect Dis· May 2017

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Taxonomer: an interactive metagenomics analysis portal for universal pathogen detection and host mRNA expression profiling.
Steven Flygare, Keith Simmon, Chase Miller, Yi Qiao, Brett Kennedy

Genome Biol· May 2016

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The Suspected Infected Prosthetic Joint: Clinical Acumen and Added Value of Laboratory Investigations.
Cathy A Petti, Gregory J Stoddard, Merle A Sande, Matthew H Samore, Keith E Simmon

PLoS One· April 2016

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Unbiased Detection of Respiratory Viruses by Use of RNA Sequencing-Based Metagenomics: a Systematic Comparison to a Commercial PCR Panel.
Erin H Graf, Keith E Simmon, Keith D Tardif, Weston Hymas, Steven Flygare

J Clin Microbiol· April 2016

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Mycobacterium franklinii sp. nov., a species closely related to members of the Mycobacterium chelonae-Mycobacterium abscessus group.
Christiane Lourenço Nogueira, Keith E Simmon, Erica Chimara, Margo Cnockaert, Juan Carlos Palomino

Int J Syst Evol Microbiol· July 2015

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Sequencing-based genotyping of mixed human papillomavirus infections by use of RipSeq software.
Keith D Tardif, Keith E Simmon, Oyvind Kommedal, Michael T Pyne, Robert Schlaberg

J Clin Microbiol· April 2013

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Isolation and identification of Kroppenstedtia eburnea isolates from multiple patient samples.
Adam P Barker, Keith E Simmon, Sam Cohen, E Susan Slechta, Mark A Fisher

J Clin Microbiol· October 2012

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Internal transcribed spacer region sequence analysis using SmartGene IDNS software for the identification of unusual clinical yeast isolates.
E Susan Slechta, Sheri L Hohmann, Keith Simmon, Kimberly E Hanson

Med Mycol· July 2012

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Dual priming oligonucleotides for broad-range amplification of the bacterial 16S rRNA gene directly from human clinical specimens.
Øyvind Kommedal, Keith Simmon, Dilek Karaca, Nina Langeland, Harald G Wiker

J Clin Microbiol· April 2012

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A systematic approach for discovering novel, clinically relevant bacteria.
Robert Schlaberg, Keith E Simmon, Mark A Fisher

Emerg Infect Dis· March 2012

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Mycobacterium chelonae-abscessus complex associated with sinopulmonary disease, Northeastern USA.
Keith E Simmon, Barbara A Brown-Elliott, Perry G Ridge, Jacob D Durtschi, Linda Bridge Mann

Emerg Infect Dis· September 2011

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Isolation and characterization of "Pseudomonas andersonii" from four cases of pulmonary granulomas and emended species description.
Keith E Simmon, Deanna C Fang, Vera Tesic, Prasanna D Khot, Enrico Giangeruso

J Clin Microbiol· April 2011

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Mycobacterium neoaurum and Mycobacterium bacteremicum sp. nov. as causes of mycobacteremia.
Barbara A Brown-Elliott, Richard J Wallace, Cathy A Petti, Linda Bridge Mann, Maria McGlasson, Keith E Simmon

J Clin Microbiol· December 2010

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Simultaneous sequence analysis of the 16S rRNA and rpoB genes by use of RipSeq software to identify Mycobacterium species.
Keith E Simmon, Øyvind Kommedal, Øystein Saebo, Bjarte Karlsen, Cathy A Petti

J Clin Microbiol· September 2010

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Phylogenetic analysis of Mycobacterium aurum and Mycobacterium neoaurum with redescription of M. aurum culture collection strains.
Keith E Simmon, Yan Yi Low, Barbara A Brown-Elliott, Richard J Wallace, Cathy A Petti

Int J Syst Evol Microbiol· June 2009

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Mollicute infections in neonates.
Rosemary C She, Keith E Simmon, Jeffrey M Bender, Krow Ampofo, Cathy A Petti

Pediatr Infect Dis J· March 2009

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Phylogenetic analysis of viridans group streptococci causing endocarditis.
Keith E Simmon, Lori Hall, Christopher W Woods, Francesc Marco, Jose M Miro

J Clin Microbiol· September 2008

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Genotypic diversity of anaerobic isolates from bloodstream infections.
Keith E Simmon, Stanley Mirrett, L Barth Reller, Cathy A Petti

J Clin Microbiol· May 2008

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Genotypic diversity of coagulase-negative staphylococci causing endocarditis: a global perspective.
Cathy A Petti, Keith E Simmon, Jose M Miro, Bruno Hoen, Francesc Marco

J Clin Microbiol· May 2008

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Culture-Negative intracerebral abscesses in children and adolescents from Streptococcus anginosus group infection: a case series.
Cathy A Petti, Keith E Simmon, Jeffrey Bender, Anne Blaschke, Kathleen A Webster

Clin Infect Dis· May 2008

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