Publications by authors named "Ken Duffy"

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Salience, legitimacy, and credibility of two end-to-end forensic single cell probabilistic systems.
Qhawe A Bhembe, Desmond S Lun, Ken R Duffy, Catherine M Grgicak

Forensic Sci Int Genet· February 2026

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Single-cell investigative genetics: Single-cell data produces genotype distributions concentrated at the true genotype across all mixture complexities.
Catherine M Grgicak, Qhawe Bhembe, Klaas Slooten, Nidhi C Sheth, Ken R Duffy

Forensic Sci Int Genet· March 2024

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Optimal age-specific vaccination control for COVID-19: An Irish case study.
Eleni Zavrakli, Andrew Parnell, David Malone, Ken Duffy, Subhrakanti Dey

PLoS One· September 2023

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Evidentiary evaluation of single cells renders highly informative forensic comparisons across multifarious admixtures.
Ken R Duffy, Desmond S Lun, Madison M Mulcahy, Leah O'Donnell, Nidhi Sheth

Forensic Sci Int Genet· May 2023

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Simultaneous Assessment of Kinship, Division Number, and Phenotype via Flow Cytometry for Hematopoietic Stem and Progenitor Cells.
Alessandro Donada, Tamar Tak, Giulio Prevedello, Idan Milo, Ken R Duffy

J Vis Exp· March 2023

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Lineage tracing reveals B cell antibody class switching is stochastic, cell-autonomous, and tuneable.
Miles B Horton, HoChan Cheon, Ken R Duffy, Daniel Brown, Shalin H Naik

Immunity· October 2022

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Maintaining naivety of T cells.
Ken Duffy

Elife· August 2022

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Author Correction: Replicative history marks transcriptional and functional disparity in the CD8 T cell memory pool.
Kaspar Bresser, Lianne Kok, Arpit C Swain, Lisa A King, Laura Jacobs, Ken R Duffy

Nat Immunol· July 2022

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Corrigendum to "The a posteriori probability of the number of contributors when conditioned on an assumed contributor" [Forensic Sci. Int. Genet. 54 (2021) 102563].
Catherine M Grgicak, Ken R Duffy, Desmond Lun

Forensic Sci Int Genet· May 2022

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Replicative history marks transcriptional and functional disparity in the CD8 T cell memory pool.
Kaspar Bresser, Lianne Kok, Arpit C Swain, Lisa A King, Laura Jacobs, Ken R Duffy

Nat Immunol· May 2022

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High-quality data from a forensically relevant single-cell pipeline enabled by low PBS and proteinase K concentrations.
Nidhi Sheth, Ken R Duffy, Catherine M Grgicak

J Forensic Sci· March 2022

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Cyton2: A Model of Immune Cell Population Dynamics That Includes Familial Instructional Inheritance.
HoChan Cheon, Andrey Kan, Giulio Prevedello, Simone C Oostindie, Simon J Dovedi, Ken R Duffy

Front Bioinform· October 2021

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The a posteriori probability of the number of contributors when conditioned on an assumed contributor.
Catherine M Grgicak, Ken R Duffy, Desmond S Lun

Forensic Sci Int Genet· September 2021

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Towards developing forensically relevant single-cell pipelines by incorporating direct-to-PCR extraction: compatibility, signal quality, and allele detection.
Nidhi Sheth, Harish Swaminathan, Amanda J Gonzalez, Ken R Duffy, Catherine M Grgicak

Int J Legal Med· May 2021

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HSPCs display within-family homogeneity in differentiation and proliferation despite population heterogeneity.
Tamar Tak, Giulio Prevedello, Gaël Simon, Noémie Paillon, Camélia Benlabiod, Ken R Duffy

Elife· May 2021

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Manipulating niche composition limits damage to haematopoietic stem cells during Plasmodium infection.
Myriam L R Haltalli, Samuel Watcham, Nicola K Wilson, Kira Eilers, Alexander Lipien, Ken R Duffy

Nat Cell Biol· December 2020

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A large-scale validation of NOCIt's a posteriori probability of the number of contributors and its integration into forensic interpretation pipelines.
Catherine M Grgicak, Slim Karkar, Xia Yearwood-Garcia, Lauren E Alfonse, Ken R Duffy

Forensic Sci Int Genet· July 2020

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Stochastically Timed Competition Between Division and Differentiation Fates Regulates the Transition From B Lymphoblast to Plasma Cell.
Jie H S Zhou, John F Markham, Ken R Duffy, Philip D Hodgkin

Front Immunol· September 2019

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Sample path properties of the average generation of a Bellman-Harris process.
Gianfelice Meli, Tom S Weber, Ken R Duffy

J Math Biol· July 2019

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Four model variants within a continuous forensic DNA mixture interpretation framework: Effects on evidential inference and reporting.
Harish Swaminathan, Muhammad O Qureshi, Catherine M Grgicak, Ken Duffy, Desmond S Lun

PLoS One· April 2019

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Multiplexed Division Tracking Dyes for Proliferation-Based Clonal Lineage Tracing.
Miles B Horton, Giulio Prevedello, Julia M Marchingo, Jie H S Zhou, Ken R Duffy

J Immunol· August 2018

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A large-scale dataset of single and mixed-source short tandem repeat profiles to inform human identification strategies: PROVEDIt.
Lauren E Alfonse, Amanda D Garrett, Desmond S Lun, Ken R Duffy, Catherine M Grgicak

Forensic Sci Int Genet· January 2018

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Inhibition of Endosteal Vascular Niche Remodeling Rescues Hematopoietic Stem Cell Loss in AML.
Delfim Duarte, Edwin D Hawkins, Olufolake Akinduro, Heather Ang, Katia De Filippo, Ken Duffy

Cell Stem Cell· January 2018

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Production of high-fidelity electropherograms results in improved and consistent DNA interpretation: Standardizing the forensic validation process.
Kelsey C Peters, Harish Swaminathan, Jennifer Sheehan, Ken R Duffy, Desmond S Lun

Forensic Sci Int Genet· November 2017

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Exploring STR signal in the single- and multicopy number regimes: Deductions from an in silico model of the entire DNA laboratory process.
Ken R Duffy, Neil Gurram, Kelsey C Peters, Genevieve Wellner, Catherine M Grgicak

Electrophoresis· March 2017

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