Publications by authors named "Kevin Libuit"

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Development of an amplicon-based sequencing approach in response to the global emergence of mpox.
Nicholas F G Chen, Chrispin Chaguza, Luc Gagne, Matthew Doucette, Sandra Smole, Erika Buzby, Joshua Hall, Stephanie Ash, Rachel Harrington, Seana Cofsky

PLoS Biol· June 2023

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Real-time, multi-pathogen wastewater genomic surveillance with Freyja 2.
Joshua I Levy, Praneeth Gangavarapu, Dylan A Pilz, Maryam Ahmadi Jesvaghane, Allison Steedman, Kevin Libuit

medRxiv· July 2025

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Advantages of Software Containerization in Public Health Infectious Disease Genomic Surveillance.
Kelsey R Florek, Erin L Young, Kutluhan Incekara, Kevin G Libuit, Curtis J Kapsak

Emerg Infect Dis· May 2025

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The use of whole-genome sequencing and development of bioinformatics to monitor overlapping outbreaks of in southern Nevada.
Andrew Gorzalski, Frank J Ambrosio, Lauryn Massic, Michelle R Scribner, Danielle Denise Siao, Kevin Libuit

Front Public Health· August 2023

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TheiaEuk: a species-agnostic bioinformatics workflow for fungal genomic characterization.
Frank J Ambrosio, Michelle R Scribner, Sage M Wright, James R Otieno, Emma L Doughty, Kevin G Libuit

Front Public Health· August 2023

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Accelerating bioinformatics implementation in public health.
Kevin G Libuit, Emma L Doughty, James R Otieno, Frank Ambrosio, Curtis J Kapsak

Microb Genom· July 2023

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Pathogen genomics in public health laboratories: successes, challenges, and lessons learned from California's SARS-CoV-2 Whole-Genome Sequencing Initiative, California COVIDNet.
Emily A Smith, Kevin G Libuit, Curtis J Kapsak, Michelle R Scribner, Sage M Wright

Microb Genom· June 2023

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Rapid Lineage Assignment of Severe Acute Respiratory Syndrome Coronavirus 2 Cases through Automated Library Preparation, Sequencing, and Bioinformatic Analysis.
Andrew J Gorzalski, Heather Kerwin, Subhash Verma, David C Hess, Joel Sevinsky, Kevin Libuit

J Mol Diagn· April 2023

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GAMBIT (Genomic Approximation Method for Bacterial Identification and Tracking): A methodology to rapidly leverage whole genome sequencing of bacterial isolates for clinical identification.
Jared Lumpe, Lynette Gumbleton, Andrew Gorzalski, Kevin Libuit, Vici Varghese

PLoS One· February 2023

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Development of an amplicon-based sequencing approach in response to the global emergence of human monkeypox virus.
Nicholas F G Chen, Chrispin Chaguza, Luc Gagne, Matthew Doucette, Sandra Smole, Kevin Libuit

medRxiv· January 2023

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Rapid repeat infection of SARS-CoV-2 by two highly distinct delta-lineage viruses.
Andrew J Gorzalski, Christina Boyles, Victoria Sepcic, Subhash Verma, Joel Sevinsky, Kevin Libuit

Diagn Microbiol Infect Dis· September 2022

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Assessment of mold contamination in hurricane-damaged homes in Houston, Texas after sanitization by volunteers.
Stephen Vesper, Kevin G Libuit, Nicolas Esguerra, Andrew Cross

Ann Civ Environ Eng· March 2022

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GalaxyTrakr: a distributed analysis tool for public health whole genome sequence data accessible to non-bioinformaticians.
Jayanthi Gangiredla, Hugh Rand, Daniel Benisatto, Justin Payne, Charles Strittmatter, Kevin Libuit

BMC Genomics· February 2021

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Draft Genome Sequences of Two Salmonella Strains Isolated from Wild Animals on the Eastern Shore of Virginia.
Kevin G Libuit, Lauren Turner

Genome Announc· May 2018

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Effect of manure application on abundance of antibiotic resistance genes and their attenuation rates in soil: field-scale mass balance approach.
Nicole Fahrenfeld, Katharine Knowlton, Leigh Anne Krometis, W Cully Hession, Kang Xia, Kevin Libuit

Environ Sci Technol· October 2015

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