Publications by authors named "Koji Inaka"

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Structural analysis shows the mode of inhibition for Staphylococcus aureus lipase by antipsychotic penfluridol.
Julia Kitadokoro, Takatsugu Hirokawa, Masayuki Kamo, Naoki Furubayashi, Yukiko Okuno, Koji Inaka

Sci Rep· April 2025

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Structural Insights into Helix-Loop-Helix Peptides for "Ligand-Targeting" Intracellular Drug Delivery via VEGF Receptor-Mediated Endocytosis.
Masataka Michigami, Ryoichi Kira, Masayuki Kamo, Takatsugu Hirokawa, Takayoshi Kinoshita, Koji Inaka

Biochem Biophys Res Commun· December 2024

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Structural insights into molecular-targeting helix-loop-helix peptide against vascular endothelial growth factor-A.
Masataka Michigami, Kunpei Notsu, Masayuki Kamo, Takatsugu Hirokawa, Takayoshi Kinoshita, Koji Inaka

Biochem Biophys Res Commun· November 2024

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Microgravity environment grown crystal structure information based engineering of direct electron transfer type glucose dehydrogenase.
Junko Okuda-Shimazaki, Hiromi Yoshida, Inyoung Lee, Katsuhiro Kojima, Nanoha Suzuki, Koji Inaka

Commun Biol· December 2022

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Crystal structure of the PX domain of Vps17p from Saccharomyces cerevisiae.
Takayuki Obita, Koji Inaka, Daisuke Kohda, Nobuo Maita

Acta Crystallogr F Struct Biol Commun· May 2022

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Dynamic interactions in the l-lactate oxidase active site facilitate substrate binding at pH4.5.
Naoki Furubayashi, Koji Inaka, Masayuki Kamo, Yasufumi Umena, Takeshi Matsuoka

Biochem Biophys Res Commun· September 2021

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Semi-empirical model to estimate ideal conditions for the growth of large protein crystals.
Hirohiko Nakamura, Sachiko Takahashi, Koji Inaka, Hiroaki Tanaka

Acta Crystallogr D Struct Biol· December 2020

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Fragment-based discovery of the first nonpeptidyl inhibitor of an S46 family peptidase.
Yasumitsu Sakamoto, Yoshiyuki Suzuki, Akihiro Nakamura, Yurie Watanabe, Mizuki Sekiya, Koji Inaka

Sci Rep· September 2019

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A novel handling-free method of mounting single protein crystals for synchrotron structure analyses at room temperature.
Yoshihisa Suzuki, Kumi Torii, Koji Inaka, Takahisa Fujiwara, Hiroaki Tanaka

Rev Sci Instrum· May 2019

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Crystallization of Human Erythrocyte Band 3, the anion exchanger, at the International Space Station "KIBO".
Hinako Hatae, Koji Inaka, Ryo Okamura, Naoki Furubayashi, Masayuki Kamo

Anal Biochem· October 2018

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Characterization of crystal water molecules in a high-affinity inhibitor and hematopoietic prostaglandin D synthase complex by interaction energy studies.
Daisuke Takaya, Koji Inaka, Akifumi Omura, Kenji Takenuki, Masashi Kawanishi

Bioorg Med Chem· September 2018

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Crystal Structure of Chitinase ChiW from Paenibacillus sp. str. FPU-7 Reveals a Novel Type of Bacterial Cell-Surface-Expressed Multi-Modular Enzyme Machinery.
Takafumi Itoh, Takao Hibi, Fumiko Suzuki, Ikumi Sugimoto, Akihiro Fujiwara, Koji Inaka

PLoS One· June 2017

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Crystallographic analysis of FAD-dependent glucose dehydrogenase.
Hirofumi Komori, Koji Inaka, Naoki Furubayashi, Michinari Honda, Yoshiki Higuchi

Acta Crystallogr F Struct Biol Commun· August 2015

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"Newton's cradle" proton relay with amide-imidic acid tautomerization in inverting cellulase visualized by neutron crystallography.
Akihiko Nakamura, Takuya Ishida, Katsuhiro Kusaka, Taro Yamada, Shinya Fushinobu, Koji Inaka

Sci Adv· August 2015

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Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity.
Yasumitsu Sakamoto, Yoshiyuki Suzuki, Ippei Iizuka, Chika Tateoka, Saori Roppongi, Koji Inaka

Sci Rep· June 2015

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Insights into the Proton Transfer Mechanism of a Bilin Reductase PcyA Following Neutron Crystallography.
Masaki Unno, Kumiko Ishikawa-Suto, Katsuhiro Kusaka, Taro Tamada, Yoshinori Hagiwara, Koji Inaka

J Am Chem Soc· April 2015

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S46 peptidases are the first exopeptidases to be members of clan PA.
Yasumitsu Sakamoto, Yoshiyuki Suzuki, Ippei Iizuka, Chika Tateoka, Saori Roppongi, Koji Inaka

Sci Rep· May 2014

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Phase-diagram-guided method for growth of a large crystal of glycoside hydrolase family 45 inverting cellulase suitable for neutron structural analysis.
Akihiko Nakamura, Takuya Ishida, Shinya Fushinobu, Katsuhiro Kusaka, Ichiro Tanaka, Koji Inaka

J Synchrotron Radiat· November 2013

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JAXA protein crystallization in space: ongoing improvements for growing high-quality crystals.
Sachiko Takahashi, Kazunori Ohta, Naoki Furubayashi, Bin Yan, Misako Koga, Koji Inaka

J Synchrotron Radiat· November 2013

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High-resolution X-ray crystal structure of bovine H-protein using the high-pressure cryocooling method.
Akifumi Higashiura, Kazunori Ohta, Mika Masaki, Masaru Sato, Koji Inaka

J Synchrotron Radiat· November 2013

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Numerical model of protein crystal growth in a diffusive field such as the microgravity environment.
Hiroaki Tanaka, Susumu Sasaki, Sachiko Takahashi, Koji Inaka, Yoshio Wada

J Synchrotron Radiat· November 2013

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Crystallization and preliminary X-ray crystallographic analysis of Pz peptidase B from Geobacillus collagenovorans MO-1.
Hiroaki Nakano, Allin Hosokawa, Ryuji Tagawa, Koji Inaka, Kazunori Ohta

Acta Crystallogr Sect F Struct Biol Cryst Commun· July 2012

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Structural insight into the stereoselective production of PGF2α by Old Yellow Enzyme from Trypanosoma cruzi.
Naoki Okamoto, Keishi Yamaguchi, Eiichi Mizohata, Keiji Tokuoka, Nahoko Uchiyama, Koji Inaka

J Biochem· November 2011

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High-Quality Protein Crystal Growth of Mouse Lipocalin-Type Prostaglandin D Synthase in Microgravity.
Koji Inaka, Sachiko Takahashi, Kosuke Aritake, Toshiharu Tsurumura, Naoki Furubayashi

Cryst Growth Des· June 2011

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Improvement in the quality of hematopoietic prostaglandin D synthase crystals in a microgravity environment.
Hiroaki Tanaka, Toshiharu Tsurumura, Kosuke Aritake, Naoki Furubayashi, Sachiko Takahashi, Koji Inaka

J Synchrotron Radiat· January 2011

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