Publications by authors named "Krishna Ramadas"

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Prediction and Assessment of Anticancer, Antiproliferative, Pharmacokinetic Properties, and Human Serum Albumin Binding Propensity of a New Bioactive Marine Cyclic Dipeptide from Exiguobacterium profundum.
Sriram Shankar, Diksha Tripathi, Subhashree Subhasmita Nayak, Ramadas Krishna, Natarajan Sakthivel

Mar Biotechnol (NY)· December 2025

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Artificial intelligence, structural, and immunoinformatics-driven multi-epitope vaccine design targeting non-structural proteins of West Nile Virus.
Rahul Mallick, Guneswar Sethi, Satyanarayan Sethi, Jeong Ho Hwang, Ramadas Krishna

In Silico Pharmacol· November 2025

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Molecular dynamics simulations, essential dynamics and MMPBSA to evaluate natural compounds as potential inhibitors for AccD6, a key drug target in the fatty acid biosynthesis pathway in Mycobacterium tuberculosis.
Chandra Jyoti Singha, Ramadas Krishna

J Mol Graph Model· January 2025

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Phosphorylation at the D56 residue of MtrA in Mycobacterium tuberculosis enhances its DNA binding affinity by modulating inter-domain interaction.
Subhashree Subhasmita Nayak, Ramadas Krishna

Comput Biol Chem· December 2024

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Development of multi-epitope based subunit vaccine against using immunoinformatics approach.
Savita Kumari R, Guneswar Sethi, Ramadas Krishna

J Biomol Struct Dyn· November 2024

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Structure based exploration of potential lead molecules against the extracellular cysteine protease (EcpA) of : a therapeutic halt.
Guneswar Sethi, Jeong Ho Hwang, Ramadas Krishna

J Biomol Struct Dyn· October 2024

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Immunoinformatics and structural aided approach to develop multi-epitope based subunit vaccine against Mycobacterium tuberculosis.
Guneswar Sethi, Rinku Polachirakkal Varghese, Avinash Kant Lakra, Subhashree Subhasmita Nayak, Ramadas Krishna

Sci Rep· July 2024

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Computational identification and analysis of deleterious non-synonymous single nucleotide polymorphisms (nsSNPs) in the human gene: a structural and functional impact.
Rajalakshmi Kumar, Manikandan Jayaraman, Krishna Ramadas, Adithan Chandrasekaran

J Biomol Struct Dyn· February 2024

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Design of multi-epitope based vaccine against a subtractive proteomics and reverse vaccinology based immunoinformatics approach.
Subhashree Subhasmita Nayak, Guneswar Sethi, Krishna Ramadas

J Biomol Struct Dyn· December 2023

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Identification and design of a multi-epitope subunit vaccine against the opportunistic pathogen : An immunoinformatics approach.
Guneswar Sethi, Rinku Polachirakkal Varghese, Ramadas Krishna

J Biomol Struct Dyn· December 2022

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Pyridine appended 2-hydrazinylthiazole derivatives: design, synthesis, and antimycobacterial studies.
Ramkishore Matsa, Parameshwar Makam, Guneswar Sethi, Ahammed Ameen Thottasseri, Aswani Raj Kizhakkandiyil, Krishna Ramadas

RSC Adv· June 2022

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Multi-epitope based vaccine design against Staphylococcus epidermidis: A subtractive proteomics and immunoinformatics approach.
Guneswar Sethi, Satyanarayan Sethi, Ramadas Krishna

Microb Pathog· April 2022

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An integrated computational investigation to unveil the structural impacts of mutation on the InhA structural gene of Mycobacterium tuberculosis.
Manikandan Jayaraman, Krishna Ramadas

J Mol Graph Model· December 2020

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Insight into the structural and functional analysis of the impact of missense mutation on cytochrome P450 oxidoreductase.
Rajalakshmi Kumar, Manikandan Jayaraman, Krishna Ramadas, Adithan Chandrasekaran

J Mol Graph Model· November 2020

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Structural insight into conformational dynamics of non-active site mutations in KasA: A Mycobacterium tuberculosis target protein.
Manikandan Jayaraman, Savita Kumari Rajendra, Krishna Ramadas

Gene· December 2019

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Purification, Characterization of Alkaline Cold Active Lipase from Acinetobacter radioresistens PR8 and Development of a New Zymography Method for Lipase Detection.
Krishna K Gupta, Sharmili Jagtap, Priya R, Krishna Ramadas

Protein Pept Lett· January 2019

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In silico modeling of Plasmodium falciparum chloroquine resistance transporter protein and biochemical studies suggest its key contribution to chloroquine resistance.
Hiasindh Ashmi Antony, Nishith Saurav Topno, Sathyanarayana N Gummadi, Devanarayanan Siva Sankar, Ramadas Krishna

Acta Trop· January 2019

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Mechanistic insights into the activity of Ptf1-p48 (pancreas transcription factor 1a): probing the interactions levels of Ptf1-p48 with E2A-E47 (transcription factor E2-alpha) and ID3 (inhibitor of DNA binding 3).
Nishith Saurav Topno, Muthu Kannan, Ramadas Krishna

J Biomol Struct Dyn· May 2018

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A novel guaiane sesquiterpene derivative, guai-2-en-10α-ol, from Ulva fasciata Delile inhibits EGFR/PI3K/Akt signaling and induces cytotoxicity in triple-negative breast cancer cells.
T Pragna Lakshmi, S Vajravijayan, Mondal Moumita, Natarajan Sakthivel, K Gunasekaran, Ramadas Krishna

Mol Cell Biochem· January 2018

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Scale-up and inhibitory studies on productivity of lipase from Acinetobacter radioresistens PR8.
Krishna Kant Gupta, Anshul Nigam, Sharmili Jagtap, Ramadas Krishna

J Biosci Bioeng· August 2017

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Molecular interaction of 2,4-diacetylphloroglucinol (DAPG) with human serum albumin (HSA): The spectroscopic, calorimetric and computational investigation.
Pragna Lakshmi T, Moumita Mondal, Krishna Ramadas, Sakthivel Natarajan

Spectrochim Acta A Mol Biomol Spectrosc· August 2017

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Inhibition of the MurA enzyme in Fusobacterium nucleatum by potential inhibitors identified through computational and in vitro approaches.
Amit Kumar, Rajagopalan Saranathan, K Prashanth, Basant K Tiwary, Ramadas Krishna

Mol Biosyst· May 2017

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One-Pot Synthesis of Densely Substituted Pyrazolo[3,4-b]-4,7-dihydropyridines.
H Surya Prakash Rao, Lakshmi Narayana Adigopula, Krishna Ramadas

ACS Comb Sci· May 2017

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Identification of natural allosteric inhibitor for Akt1 protein through computational approaches and in vitro evaluation.
T Pragna Lakshmi, Amit Kumar, Veena Vijaykumar, Sakthivel Natarajan, Ramadas Krishna

Int J Biol Macromol· March 2017

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PICI: A web server with a multi-parametric algorithm for identifying interaction sites within protein complexes.
Arindam Atanu Das, Ramadas Krishna

Bioinformation· April 2016

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