Publications by authors named "Kristine E Yoder"

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Retrointegration2023-Papers from the 7th International Conference on Retroviral Integration.
Alan N Engelman, Duane P Grandgenett, Goedele N Maertens, Kristine E Yoder, Mamuka Kvaratskhelia

Viruses· June 2025

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DNA strand breaks and gaps target retroviral intasome binding and integration.
Gayan Senavirathne, James London, Anne Gardner, Richard Fishel, Kristine E Yoder

Nat Commun· November 2023

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Prototype Foamy Virus Integrase Displays Unique Biochemical Activities among Retroviral Integrases.
Anthony J Rabe, Yow Yong Tan, Ross C Larue, Kristine E Yoder

Biomolecules· December 2021

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Retroviral prototype foamy virus intasome binding to a nucleosome target does not determine integration efficiency.
Randi M Kotlar, Nathan D Jones, Gayan Senavirathne, Anne M Gardner, Ryan K Messer, Kristine E Yoder

J Biol Chem· August 2021

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CRISPR Genome Editing Applied to the Pathogenic Retrovirus HTLV-1.
Amanda R Panfil, Patrick L Green, Kristine E Yoder

Front Cell Infect Microbiol· June 2021

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Strategies for Targeting Retroviral Integration for Safer Gene Therapy: Advances and Challenges.
Kristine E Yoder, Anthony J Rabe, Richard Fishel, Ross C Larue

Front Mol Biosci· May 2021

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Nucleosome DNA unwrapping does not affect prototype foamy virus integration efficiency or site selection.
Randi M Mackler, Nathan D Jones, Anne M Gardner, Miguel A Lopez, Cecil J Howard, Kristine E Yoder

PLoS One· November 2019

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Expression and Purification of Nuclease-Free Oxygen Scavenger Protocatechuate 3,4-Dioxygenase.
Ryan K Messer, Miguel A Lopez, Gayan Senavirathne, Kristine E Yoder

J Vis Exp· November 2019

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Prototype foamy virus intasome aggregation is mediated by outer protein domains and prevented by protocatechuic acid.
Nathan D Jones, Randi M Mackler, Miguel A Lopez, Laura E Baltierra-Jasso, Matthew P Altman, Kristine E Yoder

Sci Rep· January 2019

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CRISPR/Cas9 Genome Editing to Disable the Latent HIV-1 Provirus.
Amanda R Panfil, James A London, Patrick L Green, Kristine E Yoder

Front Microbiol· December 2018

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Expression and purification of nuclease-free protocatechuate 3,4-dioxygenase for prolonged single-molecule fluorescence imaging.
Gayan Senavirathne, Miguel A Lopez, Ryan Messer, Richard Fishel, Kristine E Yoder

Anal Biochem· September 2018

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Assembly and Purification of Prototype Foamy Virus Intasomes.
Randi M Mackler, Miguel A Lopez, Kristine E Yoder

J Vis Exp· March 2018

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Detection and Removal of Nuclease Contamination During Purification of Recombinant Prototype Foamy Virus Integrase.
Miguel A Lopez, Randi M Mackler, Matthew P Altman, Kristine E Yoder

J Vis Exp· December 2017

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Removal of nuclease contamination during purification of recombinant prototype foamy virus integrase.
Miguel A Lopez, Randi M Mackler, Kristine E Yoder

J Virol Methods· September 2016

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Host Double Strand Break Repair Generates HIV-1 Strains Resistant to CRISPR/Cas9.
Kristine E Yoder, Ralf Bundschuh

Sci Rep· July 2016

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Retroviral intasomes search for a target DNA by 1D diffusion which rarely results in integration.
Nathan D Jones, Miguel A Lopez, Jeungphill Hanne, Mitchell B Peake, Jong-Bong Lee, Kristine E Yoder

Nat Commun· April 2016

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Repair of oxidative DNA base damage in the host genome influences the HIV integration site sequence preference.
Geoffrey R Bennett, Ryan Peters, Xiao-hong Wang, Jeungphill Hanne, Robert W Sobol, Kristine E Yoder

PLoS One· November 2015

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Widespread nuclease contamination in commonly used oxygen-scavenging systems.
Gayan Senavirathne, Jiaquan Liu, Miguel A Lopez, Jeungphill Hanne, Juana Martin-Lopez, Kristine E Yoder

Nat Methods· October 2015

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The base excision repair pathway is required for efficient lentivirus integration.
Kristine E Yoder, Amy Espeseth, Xiao-hong Wang, Qingming Fang, Maria Teresa Russo

PLoS One· March 2011

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XPB mediated retroviral cDNA degradation coincides with entry to the nucleus.
Kristine E Yoder, William Roddick, Pia Hoellerbauer, Richard Fishel

Virology· February 2011

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Real-time quantitative PCR and fast QPCR have similar sensitivity and accuracy with HIV cDNA late reverse transcripts and 2-LTR circles.
Kristine E Yoder, Richard Fishel

J Virol Methods· November 2008

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PCR-based detection is unable to consistently distinguish HIV 1LTR circles.
Kristine E Yoder, Richard Fishel

J Virol Methods· December 2006

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