Publications by authors named "Kristopher Kieft"

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Engineering bacteriophages through deep mining of metagenomic motifs.
Phil Huss, Kristopher Kieft, Anthony Meger, Kyle Nishikawa, Karthik Anantharaman

Sci Adv· April 2025

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Engineering bacteriophages through deep mining of metagenomic motifs.
Phil Huss, Kristopher Kieft, Anthony Meger, Kyle Nishikawa, Karthik Anantharaman

bioRxiv· September 2024

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Ecogenomics and cultivation reveal distinctive viral-bacterial communities in the surface microlayer of a Baltic Sea slick.
Janina Rahlff, Matthias Wietz, Helge-Ansgar Giebel, Oliver Bayfield, Emelie Nilsson, Kristopher Kieft

ISME Commun· September 2023

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Sulfur cycling connects microbiomes and biogeochemistry in deep-sea hydrothermal plumes.
Zhichao Zhou, Patricia Q Tran, Alyssa M Adams, Kristopher Kieft, John A Breier

ISME J· August 2023

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Physiological and genomic evidence of cysteine degradation and aerobic hydrogen sulfide production in freshwater bacteria.
Patricia Q Tran, Samantha C Bachand, Jacob C Hotvedt, Kristopher Kieft, Elizabeth A McDaniel

mSystems· June 2023

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Gut virome dysbiosis following focal cerebral ischemia in mice.
Bharath Chelluboina, Kristopher Kieft, Adam Breister, Karthik Anantharaman, Raghu Vemuganti

J Cereb Blood Flow Metab· September 2022

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vRhyme enables binning of viral genomes from metagenomes.
Kristopher Kieft, Alyssa Adams, Rauf Salamzade, Lindsay Kalan, Karthik Anantharaman

Nucleic Acids Res· August 2022

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Virus genomics: what is being overlooked?
Kristopher Kieft, Karthik Anantharaman

Curr Opin Virol· April 2022

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Deciphering Active Prophages from Metagenomes.
Kristopher Kieft, Karthik Anantharaman

mSystems· April 2022

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METABOLIC: high-throughput profiling of microbial genomes for functional traits, metabolism, biogeochemistry, and community-scale functional networks.
Zhichao Zhou, Patricia Q Tran, Adam M Breister, Yang Liu, Kristopher Kieft

Microbiome· February 2022

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Virus-associated organosulfur metabolism in human and environmental systems.
Kristopher Kieft, Adam M Breister, Phil Huss, Alexandra M Linz, Elizabeth Zanetakos

Cell Rep· August 2021

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Ecology of inorganic sulfur auxiliary metabolism in widespread bacteriophages.
Kristopher Kieft, Zhichao Zhou, Rika E Anderson, Alison Buchan, Barbara J Campbell

Nat Commun· June 2021

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Individuals at risk for rheumatoid arthritis harbor differential intestinal bacteriophage communities with distinct metabolic potential.
Mihnea R Mangalea, David Paez-Espino, Kristopher Kieft, Anushila Chatterjee, Meagan E Chriswell

Cell Host Microbe· May 2021

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Genome diversification in globally distributed novel marine Proteobacteria is linked to environmental adaptation.
Zhichao Zhou, Patricia Q Tran, Kristopher Kieft, Karthik Anantharaman

ISME J· August 2020

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VIBRANT: automated recovery, annotation and curation of microbial viruses, and evaluation of viral community function from genomic sequences.
Kristopher Kieft, Zhichao Zhou, Karthik Anantharaman

Microbiome· June 2020

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Insect-specific flavivirus infection is restricted by innate immunity in the vertebrate host.
Maya O Tree, Dexter R McKellar, Kristopher J Kieft, Alan M Watson, Kate D Ryman

Virology· October 2016

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