Publications by authors named "Layla Hirsh"

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BAV-LLPS: a database of bacterial, archaea, and virus liquid-liquid phase separation proteins.
Cecilia B Rodriguez, Ronaldo Romario Tunque Cahui, Nicolas Demitroff, Layla Hirsh, Damien P Devos

Bioinformatics· October 2025

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A STRP-ed definition of Structured Tandem Repeats in Proteins.
Alexander Miguel Monzon, Paula Nazarena Arrías, Arne Elofsson, Pablo Mier, Miguel A Andrade-Navarro, Layla Hirsh

J Struct Biol· December 2023

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Daisy: An integrated repeat protein curation service.
Manuel Bezerra-Brandao, Ronaldo Romario Tunque Cahui, Layla Hirsh

J Struct Biol· December 2023

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CoDNaS-Q: a database of conformational diversity of the native state of proteins with quaternary structure.
Nahuel Escobedo, Ronaldo Romario Tunque Cahui, Gastón Caruso, Emilio García Ríos, Layla Hirsh

Bioinformatics· October 2022

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CoDNaS-RNA: a database of conformational diversity in the native state of RNA.
Martín González Buitrón, Ronaldo Romario Tunque Cahui, Emilio García Ríos, Layla Hirsh, Gustavo Parisi

Bioinformatics· March 2022

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RepeatsDB in 2021: improved data and extended classification for protein tandem repeat structures.
Lisanna Paladin, Martina Bevilacqua, Sara Errigo, Damiano Piovesan, Ivan Mičetić, Layla Hirsh

Nucleic Acids Res· January 2021

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Revenant: a database of resurrected proteins.
Matias Sebastian Carletti, Alexander Miguel Monzon, Emilio Garcia-Rios, Guillermo Benitez, Layla Hirsh

Database (Oxford)· January 2020

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The Pfam protein families database in 2019.
Sara El-Gebali, Jaina Mistry, Alex Bateman, Sean R Eddy, Aurélien Luciani, Layla Hirsh

Nucleic Acids Res· January 2019

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RepeatsDB-lite: a web server for unit annotation of tandem repeat proteins.
Layla Hirsh, Lisanna Paladin, Damiano Piovesan, Silvio C E Tosatto

Nucleic Acids Res· July 2018

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Classification of β-hairpin repeat proteins.
Daniel B Roche, Phuong Do Viet, Anastasia Bakulina, Layla Hirsh, Silvio C E Tosatto

J Struct Biol· February 2018

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RepeatsDB 2.0: improved annotation, classification, search and visualization of repeat protein structures.
Lisanna Paladin, Layla Hirsh, Damiano Piovesan, Miguel A Andrade-Navarro, Andrey V Kajava

Nucleic Acids Res· April 2017

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RepeatsDB 2.0: improved annotation, classification, search and visualization of repeat protein structures.
Lisanna Paladin, Layla Hirsh, Damiano Piovesan, Miguel A Andrade-Navarro, Andrey V Kajava

Nucleic Acids Res· January 2017

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Identification of repetitive units in protein structures with ReUPred.
Layla Hirsh, Damiano Piovesan, Lisanna Paladin, Silvio C E Tosatto

Amino Acids· June 2016

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The Victor C++ library for protein representation and advanced manipulation.
Layla Hirsh, Damiano Piovesan, Manuel Giollo, Carlo Ferrari, Silvio C E Tosatto

Bioinformatics· April 2015

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