Publications by authors named "Leonardo Varuzza"

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Multi-amplicon microbiome data analysis pipelines for mixed orientation sequences using QIIME2: Assessing reference database, variable region and pre-processing bias in classification of mock bacterial community samples.
Katherine A Maki, Brian Wolff, Leonardo Varuzza, Stefan J Green, Jennifer J Barb

PLoS One· January 2023

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RHD and RHCE genotyping by next-generation sequencing is an effective strategy to identify molecular variants within sickle cell disease patients.
Marcia R Dezan, Ingrid Helena Ribeiro, Valéria B Oliveira, Juliana B Vieira, Francisco C Gomes, Leonardo Varuzza

Blood Cells Mol Dis· June 2017

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High efficiency application of a mate-paired library from next-generation sequencing to postlight sequencing: Corynebacterium pseudotuberculosis as a case study for microbial de novo genome assembly.
Rommel Thiago Jucá Ramos, Adriana Ribeiro Carneiro, Siomar de Castro Soares, Silvanira Barbosa, Leonardo Varuzza

J Microbiol Methods· December 2013

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Draft Genome Sequence of Mycobacterium bovis 04-303, a Highly Virulent Strain from Argentina.
Christiane Nishibe, Ana Beatriz Canevari Castelão, Ricardo Dalla Costa, Beatriz Jeronimo Pinto, Leonardo Varuzza

Genome Announc· November 2013

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A comparative transcriptome analysis reveals expression profiles conserved across three Eimeria spp. of domestic fowl and associated with multiple developmental stages.
Jeniffer Novaes, Luiz Thibério L D Rangel, Milene Ferro, Ricardo Y Abe, Alessandra P S Manha, Leonardo Varuzza

Int J Parasitol· January 2012

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Ultra-deep sequencing reveals the microRNA expression pattern of the human stomach.
Ândrea Ribeiro-dos-Santos, André S Khayat, Artur Silva, Dayse O Alencar, Jessé Lobato, Leonardo Varuzza

PLoS One· October 2010

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Searching for molecular markers in head and neck squamous cell carcinomas (HNSCC) by statistical and bioinformatic analysis of larynx-derived SAGE libraries.
Nelson J F Silveira, Leonardo Varuzza, Ariane Machado-Lima, Marcelo S Lauretto, Daniel G Pinheiro

BMC Med Genomics· November 2008

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Simcluster: clustering enumeration gene expression data on the simplex space.
Ricardo Z N Vêncio, Leonardo Varuzza, Carlos A de B Pereira, Helena Brentani, Ilya Shmulevich

BMC Bioinformatics· July 2007

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EGene: a configurable pipeline generation system for automated sequence analysis.
Alan M Durham, André Y Kashiwabara, Fernando T G Matsunaga, Paulo H Ahagon, Flávia Rainone, Leonardo Varuzza

Bioinformatics· June 2005

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