Publications by authors named "Libusha Kelly"

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Cervicovaginal Secretions in Young Women With Bacterial Vaginosis Enhance HIV Infection.
Marla J Keller, Tao Wang, Kerry Murphy, Myrna G Serrano, William Kandalaft, Libusha Kelly

J Infect Dis· December 2025

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Pharmacomicrobiomics.
Naomi Gronich, Naama Geva-Zatorsky, Rachel Herren, Libusha Kelly, Ziv Cohen

Clin Pharmacol Ther· December 2025

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Impact of vaginal estradiol on the genitourinary syndrome of menopause, vaginal microbiome and mucosal immune mediators in women living with HIV.
Kerry Murphy, Matthew Gromisch, John Connolly, Tao Wang, Jessica McWalters, Libusha Kelly

Clin Infect Dis· December 2025

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Higher aged neutrophils and differential inflammatory profiles in sickle cell disease patients on chronic transfusion therapy versus those on hydroxyurea.
Katrina Terrigno, Zachary N Flamholz, Aakash Mahant Mahant, Ilir Agalliu, Jennifer De Los Santos, Libusha Kelly

Front Immunol· October 2025

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The physical biogeography of in health and disease.
John P Connolly, Libusha Kelly

mBio· April 2025

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Diet links gut chemistry with cancer risk in C57Bl/6 mice and human colorectal cancer patients.
Ziv Cohen, Jiahn Choi, Karina Peregrina, Saad Khan, Sarah Wolfson, Libusha Kelly

bioRxiv· January 2025

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Community-level variability in Bronx COVID-19 hospitalizations associated with differing population immunity during the second year of the pandemic.
Ryan Forster, Anthony Griffen, Johanna P Daily, Libusha Kelly

Virus Evol· November 2024

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Improving viral annotation with artificial intelligence.
Zachary N Flamholz, Charlotte Li, Libusha Kelly

mBio· October 2024

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Large language models improve annotation of prokaryotic viral proteins.
Zachary N Flamholz, Steven J Biller, Libusha Kelly

Nat Microbiol· February 2024

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The Breast Microbiome in Breast Cancer Risk and Progression: A Narrative Review.
Brandilyn A Peters, Libusha Kelly, Tao Wang, Olivier Loudig, Thomas E Rohan

Cancer Epidemiol Biomarkers Prev· January 2024

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Preparation, analysis and toxicity characterisation of the redox metabolites of the azo food dye tartrazine.
Ruth Pay, Abigail V Sharrock, Riley Elder, Alaigne Maré, Joe Bracegirdle, Libusha Kelly

Food Chem Toxicol· December 2023

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Large language models improve annotation of viral proteins.
Zachary N Flamholz, Steve J Biller, Libusha Kelly

Res Sq· May 2023

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MAT Gain of Activity Mutation in Is Associated with Resistance to MTAN Transition State Analogues.
Mu Feng, Hilda Namanja-Magliano, Saranathan Rajagopalan, Tanmay Mishra, Rodrigo G Ducati, Libusha Kelly

ACS Infect Dis· April 2023

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What do you most want to understand about how collective features emerge in microbial communities?
Daniel Segrè, Sara Mitri, Wenying Shou, Gürol M Süel, Itzhak Mizrahi, Libusha Kelly

Cell Syst· February 2023

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Dietary iron restriction protects against vaso-occlusion and organ damage in murine sickle cell disease.
Huihui Li, Jacob S Kazmi, Sungkyun Lee, Dachuan Zhang, Xin Gao, Libusha Kelly

Blood· January 2023

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Bacterial hydrogen sulfide drives cryptic redox chemistry in gut microbial communities.
Sarah J Wolfson, Reese Hitchings, Karina Peregrina, Ziv Cohen, Saad Khan, Libusha Kelly

Nat Metab· October 2022

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Genomic surveillance of SARS-CoV-2 during the first year of the pandemic in the Bronx enabled clinical and epidemiological inference.
J Maximilian Fels, Saad Khan, Ryan Forster, Karin A Skalina, Surksha Sirichand, Libusha Kelly

Cold Spring Harb Mol Case Stud· July 2022

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Genomic surveillance of SARS-CoV-2 during the first year of the pandemic in the Bronx enabled clinical and epidemiological inference.
J Maximilian Fels, Saad Khan, Ryan Forster, Karin A Skalina, Surksha Sirichand, Libusha Kelly

medRxiv· March 2022

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Bioaccumulation as a mechanism of microbiome/drug interactions.
Ziv Cohen, Libusha Kelly

Trends Microbiol· February 2022

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Longitudinally monitored immune biomarkers predict the timing of COVID-19 outcomes.
Gorka Lasso, Saad Khan, Stephanie A Allen, Margarette Mariano, Catalina Florez, Libusha Kelly

PLoS Comput Biol· January 2022

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Resolving the structure of phage-bacteria interactions in the context of natural diversity.
Kathryn M Kauffman, William K Chang, Julia M Brown, Fatima A Hussain, Joy Yang, Libusha Kelly

Nat Commun· January 2022

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Endotoxin Acts Synergistically With Clostridioides difficile Toxin B to Increase Interleukin 1β Production: A Potential Role for the Intestinal Biome in Modifying the Severity of C. difficile Colitis.
Pyae Htwe, Htay Aung, Bohm Kywe, Phyu T Niang, Thar Sann Oo, Libusha Kelly

J Infect Dis· November 2021

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Degradation of host translational machinery drives tRNA acquisition in viruses.
Joy Y Yang, Wenwen Fang, Fabiola Miranda-Sanchez, Julia M Brown, Kathryn M Kauffman, Libusha Kelly

Cell Syst· August 2021

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Bacterial Swarmers Enriched During Intestinal Stress Ameliorate Damage.
Arpan De, Weijie Chen, Hao Li, Justin R Wright, Regina Lamendella, Libusha Kelly

Gastroenterology· July 2021

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Finding phenazine.
Libusha Kelly, Sarah J Wolfson

Elife· October 2020

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