Publications by authors named "Linbu Liao"

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SC2Spa: a deep learning based approach to map transcriptome to spatial origins at cellular resolution.
Linbu Liao, Esha Madan, António M Palma, Hyobin Kim, Amit Kumar

BMC Bioinformatics· June 2025

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DeepDoublet identifies neighboring cell-dependent gene expression.
Linbu Liao, Junyoung Kim, Kanghee Cho, Junil Kim, Byung-Kwan Lim

Genomics Inform· December 2024

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Data enhancement in the age of spatial biology.
Linbu Liao, Patrick C N Martin, Hyobin Kim, Sanaz Panahandeh, Kyoung Jae Won

Adv Cancer Res· September 2024

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Development and experimental validation of computational methods for human antibody affinity enhancement.
Junxin Li, Linbu Liao, Chao Zhang, Kaifang Huang, Pengfei Zhang

Brief Bioinform· September 2024

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Neighbor-specific gene expression revealed from physically interacting cells during mouse embryonic development.
Junil Kim, Michaela Mrugala Rothová, Esha Madan, Siyeon Rhee, Guangzheng Weng, Linbu Liao

Proc Natl Acad Sci U S A· January 2023

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DeepBindBC: A practical deep learning method for identifying native-like protein-ligand complexes in virtual screening.
Haiping Zhang, Tingting Zhang, Konda Mani Saravanan, Linbu Liao, Hao Wu

Methods· September 2022

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Validation of Deep Learning-Based DFCNN in Extremely Large-Scale Virtual Screening and Application in Trypsin I Protease Inhibitor Discovery.
Haiping Zhang, Xiao Lin, Yanjie Wei, Huiling Zhang, Linbu Liao

Front Mol Biosci· June 2022

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Flower lose, a cell fitness marker, predicts COVID-19 prognosis.
Michail Yekelchyk, Esha Madan, Jochen Wilhelm, Kirsty R Short, António M Palma, Linbu Liao

EMBO Mol Med· November 2021

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Author Correction: CRISPR-assisted detection of RNA-protein interactions in living cells.
Wenkai Yi, Jingyu Li, Xiaoxuan Zhu, Xi Wang, Ligang Fan, Linbu Liao

Nat Methods· February 2021

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CRISPR-assisted detection of RNA-protein interactions in living cells.
Wenkai Yi, Jingyu Li, Xiaoxuan Zhu, Xi Wang, Ligang Fan, Linbu Liao

Nat Methods· July 2020

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DeepBindPoc: a deep learning method to rank ligand binding pockets using molecular vector representation.
Haiping Zhang, Konda Mani Saravanan, Jinzhi Lin, Linbu Liao, Justin Tze-Yang Ng

PeerJ· April 2020

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IVS2vec: A tool of Inverse Virtual Screening based on word2vec and deep learning techniques.
Haiping Zhang, Linbu Liao, Yunting Cai, Yuhui Hu, Hao Wang

Methods· August 2019

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DeepBindRG: a deep learning based method for estimating effective protein-ligand affinity.
Haiping Zhang, Linbu Liao, Konda Mani Saravanan, Peng Yin, Yanjie Wei

PeerJ· July 2019

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