Publications by authors named "Logan A Walker"

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A parallelly distributed microscope and software system for scalable high-throughput multispectral 3D imaging.
Hehai Jiang, Logan A Walker, Ye Li, Bin Duan, Xiaoman Niu

bioRxiv· June 2025

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Post-explant profiling of subcellular-scale carbon fiber intracortical electrodes and surrounding neurons enables modeling of recorded electrophysiology.
Joseph G Letner, Paras R Patel, Jung-Chien Hsieh, Israel M Smith Flores, Elena Della Valle, Logan A Walker

J Neural Eng· March 2023

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A Comparison of Lossless Compression Methods in Microscopy Data Storage Applications.
Logan A Walker, Maggie McGlothlin, Ye Li, Dawen Cai

bioRxiv· January 2023

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Genome-wide DNA hypermethylation opposes healing in patients with chronic wounds by impairing epithelial-mesenchymal transition.
Kanhaiya Singh, Yashika Rustagi, Ahmed S Abouhashem, Saba Tabasum, Priyanka Verma, Logan A Walker

J Clin Invest· September 2022

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nGauge: Integrated and Extensible Neuron Morphology Analysis in Python.
Logan A Walker, Jennifer S Williams, Ye Li, Douglas H Roossien, Wei Jie Lee

Neuroinformatics· July 2022

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Leukemia-initiating HSCs in chronic lymphocytic leukemia reveal clonal leukemogenesis and differential drug sensitivity.
Chi-Ling Chiang, Eileen Y Hu, Lingqian Chang, Jadwiga Labanowska, Kevan Zapolnik, Logan A Walker

Cell Rep· July 2022

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PP2A is a therapeutically targetable driver of cell fate decisions via a c-Myc/p21 axis in human and murine acute myeloid leukemia.
Swagata Goswami, Rajeswaran Mani, Jessica Nunes, Chi-Ling Chiang, Kevan Zapolnik, Logan A Walker, Alison Walker

Blood· March 2022

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Bitbow Enables Highly Efficient Neuronal Lineage Tracing and Morphology Reconstruction in Single Brains.
Ye Li, Logan A Walker, Yimeng Zhao, Erica M Edwards, Nigel S Michki

Front Neural Circuits· January 2022

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Robust Transcriptional Profiling and Identification of Differentially Expressed Genes With Low Input RNA Sequencing of Adult Hippocampal Neural Stem and Progenitor Populations.
Jiyeon K Denninger, Logan A Walker, Xi Chen, Altan Turkoglu, Alex Pan

Front Mol Neurosci· January 2022

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Teaching Python for Data Science: Collaborative development of a modular & interactive curriculum.
Marlena Duda, Kelly L Sovacool, Negar Farzaneh, Vy Kim Nguyen, Sarah E Haynes, Logan A Walker

J Open Source Educ· December 2021

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The molecular landscape of neural differentiation in the developing Drosophila brain revealed by targeted scRNA-seq and multi-informatic analysis.
Sylvia N Michki, Ye Li, Kayvon Sanjasaz, Yimeng Zhao, Fred Y Shen, Logan A Walker

Cell Rep· April 2021

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Light microscopy based approach for mapping connectivity with molecular specificity.
Fred Y Shen, Margaret M Harrington, Logan A Walker, Hon Pong Jimmy Cheng, Edward S Boyden

Nat Commun· September 2020

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Publisher Correction: Whole Transcriptome Analysis of Renal Intercalated Cells Predicts Lipopolysaccharide Mediated Inhibition of Retinoid X Receptor alpha Function.
Vijay Saxena, James Fitch, John Ketz, Peter White, Amy Wetzel, Logan A Walker

Sci Rep· March 2020

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TraceMontage: A method for merging multiple independent neuronal traces.
Aslan S Dizaji, Logan A Walker, Dawen Cai

J Neurosci Methods· February 2020

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CLEAR: coverage-based limiting-cell experiment analysis for RNA-seq.
Logan A Walker, Michael G Sovic, Chi-Ling Chiang, Eileen Hu, Jiyeon K Denninger

J Transl Med· February 2020

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ROR1-targeted delivery of miR-29b induces cell cycle arrest and therapeutic benefit in vivo in a CLL mouse model.
Chi-Ling Chiang, Swagata Goswami, Frank W Frissora, Zhiliang Xie, Pearlly S Yan, Logan A Walker

Blood· August 2019

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Whole Transcriptome Analysis of Renal Intercalated Cells Predicts Lipopolysaccharide Mediated Inhibition of Retinoid X Receptor alpha Function.
Vijay Saxena, James Fitch, John Ketz, Peter White, Amy Wetzel, Logan A Walker

Sci Rep· January 2019

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