Publications by authors named "Lusy Handoko"

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Evaluating Capture Sequence Performance for Single-Cell CRISPR Activation Experiments.
Xin Yi Choo, Yu Ming Lim, Khairunnisa Katwadi, Lynn Yap, Karl Tryggvason, Lusy Handoko

ACS Synth Biol· March 2021

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EpiMogrify Models H3K4me3 Data to Identify Signaling Molecules that Improve Cell Fate Control and Maintenance.
Uma S Kamaraj, Joseph Chen, Khairunnisa Katwadi, John F Ouyang, Yu Bo Yang Sun, Lusy Handoko

Cell Syst· November 2020

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Functional annotation of human long noncoding RNAs via molecular phenotyping.
Jordan A Ramilowski, Chi Wai Yip, Saumya Agrawal, Jen-Chien Chang, Yari Ciani, Lusy Handoko

Genome Res· July 2020

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JQ1 affects BRD2-dependent and independent transcription regulation without disrupting H4-hyperacetylated chromatin states.
Lusy Handoko, Bogumil Kaczkowski, Chung-Chau Hon, Marina Lizio, Masatoshi Wakamori

Epigenetics· February 2019

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Dynamic Reorganization of Extremely Long-Range Promoter-Promoter Interactions between Two States of Pluripotency.
Onkar Joshi, Shuang-Yin Wang, Tatyana Kuznetsova, Yaser Atlasi, Tianran Peng, Lusy Handoko

Cell Stem Cell· December 2015

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CTCF-mediated functional chromatin interactome in pluripotent cells.
Lusy Handoko, Han Xu, Guoliang Li, Chew Yee Ngan, Elaine Chew

Nat Genet· June 2011

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CHD7 functions in the nucleolus as a positive regulator of ribosomal RNA biogenesis.
Gabriel E Zentner, Elizabeth A Hurd, Michael P Schnetz, Lusy Handoko, Chuanping Wang

Hum Mol Genet· September 2010

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CHD7 targets active gene enhancer elements to modulate ES cell-specific gene expression.
Michael P Schnetz, Lusy Handoko, Batool Akhtar-Zaidi, Cynthia F Bartels, C Filipe Pereira

PLoS Genet· July 2010

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A signal-noise model for significance analysis of ChIP-seq with negative control.
Han Xu, Lusy Handoko, Xueliang Wei, Chaopeng Ye, Jianpeng Sheng

Bioinformatics· May 2010

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IGHMBP2 is a ribosome-associated helicase inactive in the neuromuscular disorder distal SMA type 1 (DSMA1).
Ulf-Peter Guenther, Lusy Handoko, Bernhard Laggerbauer, Sibylle Jablonka, Ashwin Chari

Hum Mol Genet· April 2009

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Clinical variability in distal spinal muscular atrophy type 1 (DSMA1): determination of steady-state IGHMBP2 protein levels in five patients with infantile and juvenile disease.
Ulf-Peter Guenther, Lusy Handoko, Raymonda Varon, Ulrich Stephani, Chang-Yong Tsao

J Mol Med (Berl)· January 2009

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Asymmetric arginine dimethylation of heterogeneous nuclear ribonucleoprotein K by protein-arginine methyltransferase 1 inhibits its interaction with c-Src.
Antje Ostareck-Lederer, Dirk H Ostareck, Karl P Rucknagel, Angelika Schierhorn, Bodo Moritz, Lusy Handoko

J Biol Chem· April 2006

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In vitro synthesized small interfering RNAs elicit RNA interference in african trypanosomes: an in vitro and in vivo analysis.
Alexander Best, Lusy Handoko, Elke Schlüter, H U Göringer

J Biol Chem· May 2005

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