Publications by authors named "Majid Taghdir"

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Investigation of Akt1 behavior on gold surface from molecular dynamics insight.
Farzane Abasi Joozdani, Mohammad Reza Amiran, Majid Taghdir

Sci Rep· October 2025

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Comparative study of stability and activity of wild-type and mutant human carbonic anhydrase II enzymes using molecular dynamics and docking simulations.
Maryam Mapar, Majid Taghdir, Bijan Ranjbar

Biochem Biophys Res Commun· November 2024

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Dynamozones are the most obvious sign of the evolution of conformational dynamics in HIV-1 protease.
Mohammad Rahimi, Majid Taghdir, Farzane Abasi Joozdani

Sci Rep· August 2023

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Molecular insights into the behavior of the allosteric and ATP-competitive inhibitors in interaction with AKT1 protein: A molecular dynamics study.
Mohammad Reza Amiran, Majid Taghdir, Farzane Abasi Joozdani

Int J Biol Macromol· July 2023

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Investigation of the inhibitory behavior of XFE and mitoxantrone molecules in interaction with AKT1 protein: a molecular dynamics simulation study.
Mohammad Reza Amiran, Majid Taghdir, Farzane Abasi Joozdani

J Mol Model· April 2023

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Design and simulation of the liposomal model by using a coarse-grained molecular dynamics approach towards drug delivery goals.
Jalil Parchekani, Abdollah Allahverdi, Majid Taghdir, Hossein Naderi-Manesh

Sci Rep· February 2022

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Thermostability of Ctenophore and Coelenterate Ca-Regulated Apo-photoproteins: A Comparative Study.
Robabeh Nemati, Maryam Molakarimi, Ammar Mohseni, Majid Taghdir, Khosrow Khalifeh

ACS Chem Biol· August 2021

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A molecular dynamics investigation on transporting mechanism of glucose through a cyclic peptide nanotube.
Farzane Abasi Joozdani, Majid Taghdir

J Biomol Struct Dyn· April 2021

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An experimental investigation on the influence of various buffer concentrations, osmolytes and gold nanoparticles on lysozyme: Spectroscopic and calorimetric study.
Soraya Mohammadi, Khosro Khajeh, Majid Taghdir, Bijan Ranjbar

Int J Biol Macromol· March 2021

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The trypsin inhibitor pro-peptide induces toxic effects in Indianmeal moth, Plodia interpunctella.
Seyed Ali Hemmati, Zeinab Takalloo, Majid Taghdir, Mohammad Mehrabadi, Saeed Balalaei

Pestic Biochem Physiol· January 2021

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Exploring single-domain antibody thermostability by molecular dynamics simulation.
Ammar Mohseni, Maryam Molakarimi, Majid Taghdir, Reza H Sajedi, Sadegh Hasannia

J Biomol Struct Dyn· September 2019

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A combination of bioactive and nonbioactive alkyl-peptides form a more stable nanofiber structure for differentiating neural stem cells: a molecular dynamics simulation survey.
Havva Mehralitabar, Majid Taghdir, Hossein Naderi-Manesh

J Biomol Struct Dyn· August 2019

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Effects of single-walled carbon nanotube on the conformation of human hepcidin: molecular dynamics simulation and binding free energy calculations.
Reza Rasoolzadeh, Faramarz Mehrnejad, Majid Taghdir, Parichehreh Yaghmaei

J Biomol Struct Dyn· May 2019

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Reaction mechanism of the bioluminescent protein mnemiopsin1 revealed by X-ray crystallography and QM/MM simulations.
Maryam Molakarimi, Michael A Gorman, Ammar Mohseni, Zaiddodine Pashandi, Majid Taghdir

J Biol Chem· January 2019

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Structural and functional consequences of EF-hand I recovery in mnemiopsin 2.
Vahab Jafarian, Reza H Sajedi, Saman Hosseinkhani, Reyhaneh Sariri, Majid Taghdir

Int J Biol Macromol· October 2018

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Molecular cloning, prokaryotic expression, purification, structural studies and functional implications of Heat Shock Protein 70 (Hsp70) from Rutilus frisii kutum.
Zohreh Jahangirizadeh, Hossein Ghafouri, Reza H Sajedi, Sajjad Sarikhan, Majid Taghdir

Int J Biol Macromol· March 2018

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Understanding the inhibitory mechanism of BIT225 drug against p7 viroporin using computational study.
Esmaeil Behmard, Parviz Abdolmaleki, Majid Taghdir

Biophys Chem· February 2018

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Renin inhibition by soyasaponin I: a potent native anti-hypertensive compound.
Zeinab Tavassoli, Majid Taghdir, Bijan Ranjbar

J Biomol Struct Dyn· January 2018

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QM/MM simulations provide insight into the mechanism of bioluminescence triggering in ctenophore photoproteins.
Maryam Molakarimi, Ammar Mohseni, Majid Taghdir, Zaiddodine Pashandi, Michael A Gorman

PLoS One· October 2017

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Molecular dynamics investigation on structural and transport properties of p7 ion channel.
Esmaeil Behmard, Parviz Abdolmaleki, Majid Taghdir

J Biomol Struct Dyn· September 2017

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Ca2+ Binding and Conformational Switch of the Photoprotein Mnemiopsin.
Shima Tarahomi, Reza H Sajedi, Hossein Rahmani, Bijan Ranjbar, Majid Taghdir

Protein Pept Lett· August 2017

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Photoinactivation related dynamics of ctenophore photoproteins: Insights from molecular dynamics simulation under electric-field.
Zaiddodine Pashandi, Maryam Molakarimi, Ammar Mohseni, Reza H Sajedi, Majid Taghdir

Biochem Biophys Res Commun· August 2017

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Light induced structural changes of the photoprotein mnemiopsin: Characterization and contribution in photoinactivation.
Zaiddodine Pashandi, Maryam Molakarimi, Reza H Sajedi, Majid Taghdir, Hossein Naderi-Manesh

J Photochem Photobiol B· December 2016

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Is unphosphorylated Rex, as multifunctional protein of HTLV-1, a fully intrinsically disordered protein? An in silico study.
Mitra Kheirabadi, Majid Taghdir

Biochem Biophys Rep· December 2016

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Engineering of a disulfide loop instead of a Zn binding loop restores the anti-proliferative, anti-angiogenic and anti-tumor activities of the N-terminal fragment of endostatin: Mechanistic and therapeutic insights.
Reyhane Chamani, S Mohsen Asghari, Ali Mohammad Alizadeh, Sedigheh Eskandari, Kamran Mansouri, Majid Taghdir

Vascul Pharmacol· September 2015

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