Publications by authors named "Mala Samaranayake"

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Enzymatic methyl sequencing detects DNA methylation at single-base resolution from picograms of DNA.
Romualdas Vaisvila, V K Chaithanya Ponnaluri, Zhiyi Sun, Bradley W Langhorst, Lana Saleh, Mala Samaranayake

Genome Res· July 2021

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Nondestructive enzymatic deamination enables single-molecule long-read amplicon sequencing for the determination of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution.
Zhiyi Sun, Romualdas Vaisvila, Laura-Madison Hussong, Bo Yan, Chloé Baum, Mala Samaranayake

Genome Res· February 2021

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Structure and cleavage activity of the tetrameric MspJI DNA modification-dependent restriction endonuclease.
John R Horton, Megumu Yamada Mabuchi, Devora Cohen-Karni, Xing Zhang, Rose M Griggs, Mala Samaranayake

Nucleic Acids Res· October 2012

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A methylation and phosphorylation switch between an adjacent lysine and serine determines human DNMT1 stability.
Pierre-Olivier Estève, Yanqi Chang, Mala Samaranayake, Anup K Upadhyay, John R Horton

Nat Struct Mol Biol· January 2011

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Regulation of DNMT1 stability through SET7-mediated lysine methylation in mammalian cells.
Pierre-Olivier Estève, Hang Gyeong Chin, Jack Benner, George R Feehery, Mala Samaranayake

Proc Natl Acad Sci U S A· March 2009

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Transcriptional pausing and stalling causes multiple clustered mutations by human activation-induced deaminase.
Chandrika Canugovi, Mala Samaranayake, Ashok S Bhagwat

FASEB J· January 2009

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Evaluation of molecular models for the affinity maturation of antibodies: roles of cytosine deamination by AID and DNA repair.
Mala Samaranayake, Janusz M Bujnicki, Michael Carpenter, Ashok S Bhagwat

Chem Rev· February 2006

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Human activation-induced cytidine deaminase causes transcription-dependent, strand-biased C to U deaminations.
Anjum Sohail, Joanna Klapacz, Mala Samaranayake, Asad Ullah, Ashok S Bhagwat

Nucleic Acids Res· June 2003

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