Publications by authors named "Malene Juul"

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Author Correction: Analyses of non-coding somatic drivers in 2,658 cancer whole genomes.
Esther Rheinbay, Morten Muhlig Nielsen, Federico Abascal, Jeremiah A Wala, Ofer Shapira, Randi Istrup Juul, Malene Juul

Nature· February 2023

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The landscape and driver potential of site-specific hotspots across cancer genomes.
Randi Istrup Juul, Morten Muhlig Nielsen, Malene Juul, Lars Feuerbach, Jakob Skou Pedersen

NPJ Genom Med· May 2021

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Analyses of non-coding somatic drivers in 2,658 cancer whole genomes.
Esther Rheinbay, Morten Muhlig Nielsen, Federico Abascal, Jeremiah A Wala, Ofer Shapira, Randi Istrup Juul, Malene Juul

Nature· February 2020

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EBADIMEX: an empirical Bayes approach to detect joint differential expression and methylation and to classify samples.
Tobias Madsen, Michał Świtnicki, Malene Juul, Jakob Skou Pedersen

Stat Appl Genet Mol Biol· November 2019

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ncdDetect2: improved models of the site-specific mutation rate in cancer and driver detection with robust significance evaluation.
Malene Juul, Tobias Madsen, Qianyun Guo, Johanna Bertl, Asger Hobolth

Bioinformatics· January 2019

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A site specific model and analysis of the neutral somatic mutation rate in whole-genome cancer data.
Johanna Bertl, Qianyun Guo, Malene Juul, Søren Besenbacher, Morten Muhlig Nielsen

BMC Bioinformatics· April 2018

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Pan-cancer screen for mutations in non-coding elements with conservation and cancer specificity reveals correlations with expression and survival.
Henrik Hornshøj, Morten Muhlig Nielsen, Nicholas A Sinnott-Armstrong, Michał P Świtnicki, Malene Juul

NPJ Genom Med· January 2018

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Non-coding cancer driver candidates identified with a sample- and position-specific model of the somatic mutation rate.
Malene Juul, Johanna Bertl, Qianyun Guo, Morten Muhlig Nielsen, Michał Świtnicki

Elife· March 2017

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PINCAGE: probabilistic integration of cancer genomics data for perturbed gene identification and sample classification.
Michał P Świtnicki, Malene Juul, Tobias Madsen, Karina D Sørensen, Jakob S Pedersen

Bioinformatics· May 2016

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Mutational context and diverse clonal development in early and late bladder cancer.
Iver Nordentoft, Philippe Lamy, Karin Birkenkamp-Demtröder, Karey Shumansky, Søren Vang, Malene Juul

Cell Rep· June 2014

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