Publications by authors named "Manuel Matzinger"

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In vivo crosslinking and effective 2D enrichment for proteome wide interactome studies.
Philipp Bräuer, Laszlo Tirian, Fränze Müller, Karl Mechtler, Manuel Matzinger

Commun Chem· August 2025

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Developing a new cleavable crosslinker reagent for in-cell crosslinking.
Fränze Müller, Bogdan R Brutiu, Iakovos Saridakis, Thomas Leischner, Micha J Birklbauer, Manuel Matzinger

Commun Chem· June 2025

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Challenging the Astral mass analyzer to quantify up to 5,300 proteins per single cell at unseen accuracy to uncover cellular heterogeneity.
Julia A Bubis, Tabiwang N Arrey, Eugen Damoc, Bernard Delanghe, Jana Slovakova, Manuel Matzinger

Nat Methods· March 2025

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Author Correction: Proteome-wide non-cleavable crosslink identification with MS Annika 3.0 reveals the structure of the C. elegans Box C/D complex.
Micha J Birklbauer, Fränze Müller, Sowmya Sivakumar Geetha, Manuel Matzinger, Karl Mechtler

Commun Chem· February 2025

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Proteome-wide non-cleavable crosslink identification with MS Annika 3.0 reveals the structure of the C. elegans Box C/D complex.
Micha J Birklbauer, Fränze Müller, Sowmya Sivakumar Geetha, Manuel Matzinger, Karl Mechtler

Commun Chem· December 2024

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Micropillar arrays, wide window acquisition and AI-based data analysis improve comprehensiveness in multiple proteomic applications.
Manuel Matzinger, Anna Schmücker, Ramesh Yelagandula, Karel Stejskal, Gabriela Krššáková

Nat Commun· February 2024

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A High-Sensitivity Low-Nanoflow LC-MS Configuration for High-Throughput Sample-Limited Proteomics.
Runsheng Zheng, Manuel Matzinger, Rupert L Mayer, Alec Valenta, Xuefei Sun

Anal Chem· December 2023

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Improving single cell proteomics experiments: how can we best utilize latest-generation data acquisition and MS instrument architecture?
Manuel Matzinger, Karl Mechtler

Expert Rev Proteomics· November 2023

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MS Annika 2.0 Identifies Cross-Linked Peptides in MS2-MS3-Based Workflows at High Sensitivity and Specificity.
Micha J Birklbauer, Manuel Matzinger, Fränze Müller, Karl Mechtler, Viktoria Dorfer

J Proteome Res· September 2023

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Label-free single cell proteomics utilizing ultrafast LC and MS instrumentation: A valuable complementary technique to multiplexing.
Manuel Matzinger, Rupert L Mayer, Karl Mechtler

Proteomics· July 2023

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Robust and Easy-to-Use One-Pot Workflow for Label-Free Single-Cell Proteomics.
Manuel Matzinger, Elisabeth Müller, Gerhard Dürnberger, Peter Pichler, Karl Mechtler

Anal Chem· March 2023

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A molecular network of conserved factors keeps ribosomes dormant in the egg.
Friederike Leesch, Laura Lorenzo-Orts, Carina Pribitzer, Irina Grishkovskaya, Josef Roehsner, Manuel Matzinger

Nature· January 2023

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Deep Proteome Profiling with Reduced Carryover Using Superficially Porous Microfabricated nanoLC Columns.
Karel Stejskal, Op de Beeck Jeff, Manuel Matzinger, Gerhard Dürnberger, Alexander Boychenko

Anal Chem· November 2022

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Mimicked synthetic ribosomal protein complex for benchmarking crosslinking mass spectrometry workflows.
Manuel Matzinger, Adrian Vasiu, Mathias Madalinski, Fränze Müller, Florian Stanek

Nat Commun· July 2022

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MS Annika: A New Cross-Linking Search Engine.
Georg J Pirklbauer, Christian E Stieger, Manuel Matzinger, Stephan Winkler, Karl Mechtler

J Proteome Res· May 2021

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Cleavable Cross-Linkers and Mass Spectrometry for the Ultimate Task of Profiling Protein-Protein Interaction Networks .
Manuel Matzinger, Karl Mechtler

J Proteome Res· January 2021

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AMPK Enhances Transcription of Selected Nrf2 Target Genes via Negative Regulation of Bach1.
Katrin Fischhuber, Manuel Matzinger, Elke H Heiss

Front Cell Dev Biol· July 2020

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Fast and Highly Efficient Affinity Enrichment of Azide-A-DSBSO Cross-Linked Peptides.
Manuel Matzinger, Wolfgang Kandioller, Philipp Doppler, Elke H Heiss, Karl Mechtler

J Proteome Res· May 2020

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AMPK leads to phosphorylation of the transcription factor Nrf2, tuning transactivation of selected target genes.
Manuel Matzinger, Katrin Fischhuber, Daniel Pölöske, Karl Mechtler, Elke H Heiss

Redox Biol· January 2020

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Activation of Nrf2 signaling by natural products-can it alleviate diabetes?
Manuel Matzinger, Katrin Fischhuber, Elke H Heiss

Biotechnol Adv· November 2018

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