Publications by authors named "Marc Feuermann"

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MITE: the Minimum Information about a Tailoring Enzyme database for capturing specialized metabolite biosynthesis.
Adriano Rutz, Daniel Probst, César Aguilar, Daniel Y Akiyama, Fabrizio Alberti, Marc Feuermann

Nucleic Acids Res· September 2025

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A compendium of human gene functions derived from evolutionary modelling.
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Anushya Muruganujan, Suzanna E Lewis

Nature· April 2025

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MIBiG 4.0: advancing biosynthetic gene cluster curation through global collaboration.
Mitja M Zdouc, Kai Blin, Nico L L Louwen, Jorge Navarro, Catarina Loureiro, Marc Feuermann

Nucleic Acids Res· January 2025

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EnzChemRED, a rich enzyme chemistry relation extraction dataset.
Po-Ting Lai, Elisabeth Coudert, Lucila Aimo, Kristian Axelsen, Lionel Breuza, Marc Feuermann

Sci Data· September 2024

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Interpreting Gene Ontology Annotations Derived from Sequence Homology Methods.
Marc Feuermann, Pascale Gaudet

Methods Mol Biol· July 2024

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EnzChemRED, a rich enzyme chemistry relation extraction dataset.
Po-Ting Lai, Elisabeth Coudert, Lucila Aimo, Kristian Axelsen, Lionel Breuza, Marc Feuermann

ArXiv· April 2024

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Two different types of tandem sequences mediate the overexpression of in azole-resistant .
Tsuyoshi Yamada, Mari Maeda, Hiroaki Nagai, Karine Salamin, Yun-Tsan Chang, Marc Feuermann

Antimicrob Agents Chemother· November 2023

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The Gene Ontology knowledgebase in 2023.

Genetics· May 2023

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Gene Amplification of : a New Mechanism of Resistance to Azole Compounds in Trichophyton indotineae.
Tsuyoshi Yamada, Takashi Yaguchi, Mari Maeda, Mohamed Mahdi Alshahni, Karine Salamin, Marc Feuermann

Antimicrob Agents Chemother· June 2022

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SwissBioPics-an interactive library of cell images for the visualization of subcellular location data.
Philippe Le Mercier, Jerven Bolleman, Edouard de Castro, Elisabeth Gasteiger, Parit Bansal, Marc Feuermann

Database (Oxford)· April 2022

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Itraconazole resistance of Trichophyton rubrum mediated by the ABC transporter TruMDR2.
Tsuyoshi Yamada, Takashi Yaguchi, Takashi Tamura, Christine Pich, Karine Salamin, Marc Feuermann

Mycoses· August 2021

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MFS1, a Pleiotropic Transporter in Dermatophytes That Plays a Key Role in Their Intrinsic Resistance to Chloramphenicol and Fluconazole.
Tsuyoshi Yamada, Takashi Yaguchi, Karine Salamin, Emmanuella Guenova, Marc Feuermann

J Fungi (Basel)· July 2021

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Diverse Taxonomies for Diverse Chemistries: Enhanced Representation of Natural Product Metabolism in UniProtKB.
Marc Feuermann, Emmanuel Boutet, Anne Morgat, Kristian B Axelsen, Parit Bansal

Metabolites· January 2021

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Term Matrix: a novel Gene Ontology annotation quality control system based on ontology term co-annotation patterns.
Valerie Wood, Seth Carbon, Midori A Harris, Antonia Lock, Stacia R Engel, Marc Feuermann

Open Biol· September 2020

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Trichophyton rubrum Azole Resistance Mediated by a New ABC Transporter, TruMDR3.
Michel Monod, Marc Feuermann, Karine Salamin, Marina Fratti, Maya Makino

Antimicrob Agents Chemother· November 2019

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SynGO: An Evidence-Based, Expert-Curated Knowledge Base for the Synapse.
Frank Koopmans, Pim van Nierop, Maria Andres-Alonso, Andrea Byrnes, Tony Cijsouw, Marc Feuermann

Neuron· July 2019

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Exploring autophagy with Gene Ontology.
Paul Denny, Marc Feuermann, David P Hill, Ruth C Lovering, Helene Plun-Favreau

Autophagy· March 2019

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Large-scale inference of gene function through phylogenetic annotation of Gene Ontology terms: case study of the apoptosis and autophagy cellular processes.
Marc Feuermann, Pascale Gaudet, Huaiyu Mi, Suzanna E Lewis, Paul D Thomas

Database (Oxford)· November 2017

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RNA Sequencing-Based Genome Reannotation of the Dermatophyte and Characterization of Its Secretome and Whole Gene Expression Profile during Infection.
Van Du T Tran, Niccolò De Coi, Marc Feuermann, Emanuel Schmid-Siegert, Elena-Tatiana Băguţ

mSystems· August 2016

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Comparative and functional genomics provide insights into the pathogenicity of dermatophytic fungi.
Anke Burmester, Ekaterina Shelest, Gernot Glöckner, Christoph Heddergott, Susann Schindler, Marc Feuermann

Genome Biol· February 2012

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The IntAct molecular interaction database in 2012.
Samuel Kerrien, Bruno Aranda, Lionel Breuza, Alan Bridge, Fiona Broackes-Carter, Marc Feuermann

Nucleic Acids Res· January 2012

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The UniProt-GO Annotation database in 2011.
Emily C Dimmer, Rachael P Huntley, Yasmin Alam-Faruque, Tony Sawford, Claire O'Donovan, Marc Feuermann

Nucleic Acids Res· January 2012

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Identification of novel secreted proteases during extracellular proteolysis by dermatophytes at acidic pH.
Dev Sriranganadane, Patrice Waridel, Karine Salamin, Marc Feuermann, Bernard Mignon

Proteomics· November 2011

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The yeast Ccr4-Not complex controls ubiquitination of the nascent-associated polypeptide (NAC-EGD) complex.
Olesya Panasenko, Emilie Landrieux, Marc Feuermann, Andrija Finka, Nicole Paquet

J Biol Chem· October 2006

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