Publications by authors named "Marco Marcia"

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Functional Relevance of CASP16 Nucleic Acid Predictions as Evaluated by Structure Providers.
Rachael C Kretsch, Reinhard Albrecht, Ebbe S Andersen, Hsuan-Ai Chen, Wah Chiu, Marco Marcia

Proteins· January 2026

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Controlled dynamic remodeling of the spliceosome active site enables the first step of splicing.
Gianfranco Martino, Jacopo Manigrasso, Giuseppina La Sala, Marco Marcia, Marco De Vivo

Proc Natl Acad Sci U S A· January 2026

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Template-based RNA structure prediction advanced through a blind code competition.
Youhan Lee, Shujun He, Toshiyuki Oda, G John Rao, Yehyun Kim, Marco Marcia

bioRxiv· December 2025

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Dynamic assembly of a large multidomain ribozyme visualized by cryo-electron microscopy.
Shekhar Jadhav, Mauro Maiorca, Jacopo Manigrasso, Spandan Saha, Auriane Rakitch, Marco Marcia

Nat Commun· November 2025

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Functional relevance of CASP16 nucleic acid predictions as evaluated by structure providers.
Rachael C Kretsch, Reinhard Albrecht, Ebbe S Andersen, Hsuan-Ai Chen, Wah Chiu, Marco Marcia

bioRxiv· April 2025

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biGMamAct: efficient CRISPR/Cas9-mediated docking of large functional DNA cargoes at the locus.
Martin Pelosse, Marco Marcia

Synth Biol (Oxf)· February 2025

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On the Power and Challenges of Atomistic Molecular Dynamics to Investigate RNA Molecules.
Stefano Muscat, Gianfranco Martino, Jacopo Manigrasso, Marco Marcia, Marco De Vivo

J Chem Theory Comput· August 2024

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Targeting the conserved active site of splicing machines with specific and selective small molecule modulators.
Ilaria Silvestri, Jacopo Manigrasso, Alessandro Andreani, Nicoletta Brindani, Caroline Mas, Marco Marcia

Nat Commun· June 2024

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G·U base pairing motifs in long non-coding RNAs.
Karina Belen Sabalette, Liubov Makarova, Marco Marcia

Biochimie· November 2023

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The new world of RNA diagnostics and therapeutics.
Giovanni Blandino, Roberto Dinami, Marco Marcia, Eleni Anastasiadou, Brid M Ryan

J Exp Clin Cancer Res· July 2023

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ADAR RNA editing on antisense RNAs results in apparent U-to-C base changes on overlapping sense transcripts.
Riccardo Pecori, Isabel Chillón, Claudio Lo Giudice, Annette Arnold, Sandra Wüst, Marco Marcia

Front Cell Dev Biol· January 2023

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The multiple molecular dimensions of long noncoding RNAs that regulate gene expression and tumorigenesis.
Marco Marcia

Curr Opin Oncol· March 2022

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Author Correction: Visualizing group II intron dynamics between the first and second steps of splicing.
Jacopo Manigrasso, Isabel Chillón, Vito Genna, Pietro Vidossich, Srinivas Somarowthu, Marco Marcia

Nat Commun· January 2022

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Noncoding RNAs: biology and applications-a Keystone Symposia report.
Jennifer Cable, Edith Heard, Tetsuro Hirose, Kannanganattu V Prasanth, Ling-Ling Chen, Marco Marcia

Ann N Y Acad Sci· December 2021

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Screening strategies for identifying RNA- and ribonucleoprotein-targeted compounds.
William J Martin, Paola Grandi, Marco Marcia

Trends Pharmacol Sci· September 2021

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Finding the Ion in the RNA-Stack: Can Computational Models Accurately Predict Key Functional Elements in Large Macromolecular Complexes?
Marco Marcia, Jacopo Manigrasso, Marco De Vivo

J Chem Inf Model· June 2021

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The molecular structure of long non-coding RNAs: emerging patterns and functional implications.
Isabel Chillón, Marco Marcia

Crit Rev Biochem Mol Biol· December 2020

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Visualizing the functional 3D shape and topography of long noncoding RNAs by single-particle atomic force microscopy and in-solution hydrodynamic techniques.
Tina Uroda, Isabel Chillón, Paolo Annibale, Jean-Marie Teulon, Ombeline Pessey, Marco Marcia

Nat Protoc· June 2020

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Visualizing group II intron dynamics between the first and second steps of splicing.
Jacopo Manigrasso, Isabel Chillón, Vito Genna, Pietro Vidossich, Srinivas Somarowthu, Marco Marcia

Nat Commun· June 2020

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Conserved Pseudoknots in lncRNA MEG3 Are Essential for Stimulation of the p53 Pathway.
Tina Uroda, Eleni Anastasakou, Annalisa Rossi, Jean-Marie Teulon, Jean-Luc Pellequer, Marco Marcia

Mol Cell· September 2019

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A group II intron-encoded protein interacts with the cellular replicative machinery through the β-sliding clamp.
Fernando M García-Rodríguez, José L Neira, Marco Marcia, María D Molina-Sánchez, Nicolás Toro

Nucleic Acids Res· August 2019

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Topology and enzymatic properties of a canonical Polycomb repressive complex 1 isoform.
Matteo Colombo, Ombeline Pessey, Marco Marcia

FEBS Lett· July 2019

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A Transient and Flexible Cation-π Interaction Promotes Hydrolysis of Nucleic Acids in DNA and RNA Nucleases.
Vito Genna, Marco Marcia, Marco De Vivo

J Am Chem Soc· July 2019

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Second-Shell Basic Residues Expand the Two-Metal-Ion Architecture of DNA and RNA Processing Enzymes.
Vito Genna, Matteo Colombo, Marco De Vivo, Marco Marcia

Structure· January 2018

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Identification of high-confidence RNA regulatory elements by combinatorial classification of RNA-protein binding sites.
Yang Eric Li, Mu Xiao, Binbin Shi, Yu-Cheng T Yang, Dong Wang, Marco Marcia

Genome Biol· September 2017

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