Publications by authors named "Marcus Davy"

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AssemblyQC: a Nextflow pipeline for reproducible reporting of assembly quality.
Usman Rashid, Chen Wu, Jason Shiller, Ken Smith, Ross Crowhurst, Marcus Davy

Bioinformatics· August 2024

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Mapping QTL associated with resistance to pv. in kiwifruit ( var. ).
Casey Flay, V Vaughan Symonds, Roy Storey, Marcus Davy, Paul Datson

Front Plant Sci· March 2024

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The Relative Power of Structural Genomic Variation versus SNPs in Explaining the Quantitative Trait Growth in the Marine Teleost .
Mike Ruigrok, Bing Xue, Andrew Catanach, Mengjie Zhang, Linley Jesson, Marcus Davy

Genes (Basel)· June 2022

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Differential expression analyses reveal extensive transcriptional plasticity induced by temperature in New Zealand silver trevally ().
Noemie Valenza-Troubat, Marcus Davy, Roy Storey, Matthew J Wylie, Elena Hilario

Evol Appl· February 2022

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The genome of New Zealand trevally (Carangidae: Pseudocaranx georgianus) uncovers a XY sex determination locus.
Andrew Catanach, Mike Ruigrok, Deepa Bowatte, Marcus Davy, Roy Storey

BMC Genomics· November 2021

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Construction of a high-density genetic map for hexaploid kiwifruit (Actinidia chinensis var. deliciosa) using genotyping by sequencing.
Elizabeth Popowski, Susan J Thomson, Mareike Knäbel, Jibran Tahir, Ross N Crowhurst, Marcus Davy

G3 (Bethesda)· July 2021

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CRISPR-Cas9 enrichment and long read sequencing for fine mapping in plants.
Elena López-Girona, Marcus W Davy, Nick W Albert, Elena Hilario, Maia E M Smart

Plant Methods· September 2020

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Comparison of two different host plant genera responding to grapevine leafroll-associated virus 3 infection.
Cecilia A Prator, Kar Mun Chooi, Dan Jones, Marcus W Davy, Robin M MacDiarmid

Sci Rep· May 2020

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A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants.
Sarah M Pilkington, Ross Crowhurst, Elena Hilario, Simona Nardozza, Lena Fraser, Marcus Davy

BMC Genomics· April 2018

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Transcriptome Analysis of Kiwifruit (Actinidia chinensis) Bark in Response to Armoured Scale Insect (Hemiberlesia lataniae) Feeding.
M Garry Hill, Kirstin V Wurms, Marcus W Davy, Elaine Gould, Andrew Allan

PLoS One· June 2016

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Random Tagging Genotyping by Sequencing (rtGBS), an Unbiased Approach to Locate Restriction Enzyme Sites across the Target Genome.
Elena Hilario, Lorna Barron, Cecilia H Deng, Paul M Datson, Nihal De Silva, Marcus W Davy

PLoS One· June 2016

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Microarray analysis of kiwifruit (Actinidia chinensis) bark following challenge by the sucking insect Hemiberlesia lataniae (Hemiptera: Diaspididae).
M Garry Hill, Kirstin V Wurms, Marcus W Davy, Elaine Gould, Andrew Allan

Genom Data· March 2016

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Effects of kiwifruit extracts on colonic gene and protein expression levels in IL-10 gene-deficient mice.
Shelley J Edmunds, Nicole C Roy, Marcus Davy, Janine M Cooney, Matthew P G Barnett

Br J Nutr· July 2012

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U-2012: An improved Lowry protein assay, insensitive to sample color, offering reagent stability and enhanced sensitivity.
Girish C Upreti, Yanming Wang, Alona Finn, Abigail Sharrock, Nicholas Feisst, Marcus Davy

Biotechniques· March 2012

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Changes in colon gene expression associated with increased colon inflammation in interleukin-10 gene-deficient mice inoculated with Enterococcus species.
Matthew P G Barnett, Warren C McNabb, Adrian L Cookson, Shuotun Zhu, Marcus Davy

BMC Immunol· July 2010

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A rapid transcriptional activation is induced by the dormancy-breaking chemical hydrogen cyanamide in kiwifruit (Actinidia deliciosa) buds.
Eric F Walton, Rong-Mei Wu, Annette C Richardson, Marcus Davy, Roger P Hellens

J Exp Bot· December 2009

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Analysis of expressed sequence tags from Actinidia: applications of a cross species EST database for gene discovery in the areas of flavor, health, color and ripening.
Ross N Crowhurst, Andrew P Gleave, Elspeth A MacRae, Charles Ampomah-Dwamena, Ross G Atkinson, Marcus W Davy

BMC Genomics· July 2008

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Conversion of MapMan to allow the analysis of transcript data from Solanaceous species: effects of genetic and environmental alterations in energy metabolism in the leaf.
Ewa Urbanczyk-Wochniak, Björn Usadel, Oliver Thimm, Adriano Nunes-Nesi, Fernando Carrari, Marcus Davy

Plant Mol Biol· March 2006

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