Publications by authors named "Maria Fookes"

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Using 16s rRNA sequencing to characterize the microbiome of tropical cutaneous ulcer disease: insights into the microbial landscape and implications for diagnosis and treatment.
Becca L Handley, Oliver Sokana, Kennedy Kwasi Addo, Josef Wagner, María Fookes

Microb Genom· May 2024

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Genetic Markers in Paratyphi C Reveal Primary Adaptation to Pigs.
Satheesh Nair, Maria Fookes, Craig Corton, Nicholas R Thomson, John Wain

Microorganisms· April 2020

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Whole genome sequence of Vibrio cholerae directly from dried spotted filter paper.
Angèle H M Bénard, Etienne Guenou, Maria Fookes, Jerome Ateudjieu, Watipaso Kasambara

PLoS Negl Trop Dis· May 2019

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Functional analysis of Salmonella Typhi adaptation to survival in water.
Robert A Kingsley, Gemma Langridge, Sarah E Smith, Carine Makendi, Maria Fookes

Environ Microbiol· November 2018

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Morphological, genomic and transcriptomic responses of Klebsiella pneumoniae to the last-line antibiotic colistin.
Amy K Cain, Christine J Boinett, Lars Barquist, Janina Dordel, Maria Fookes

Sci Rep· June 2018

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Direct Whole-Genome Sequencing of Cutaneous Strains of Haemophilus ducreyi.
Michael Marks, Maria Fookes, Josef Wagner, Rosanna Ghinai, Oliver Sokana

Emerg Infect Dis· April 2018

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Dynamics of cholera epidemics from Benin to Mauritania.
Sandra Moore, Anthony Zunuo Dongdem, David Opare, Paul Cottavoz, Maria Fookes

PLoS Negl Trop Dis· April 2018

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Diagnostics for Yaws Eradication: Insights From Direct Next-Generation Sequencing of Cutaneous Strains of Treponema pallidum.
Michael Marks, Maria Fookes, Josef Wagner, Robert Butcher, Rosanna Ghinai

Clin Infect Dis· March 2018

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Mycoplasma genitalium: whole genome sequence analysis, recombination and population structure.
Maria C Fookes, James Hadfield, Simon Harris, Surendra Parmar, Magnus Unemo

BMC Genomics· December 2017

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Transcriptome and proteome analysis of Salmonella enterica serovar Typhimurium systemic infection of wild type and immune-deficient mice.
Olusegun Oshota, Max Conway, Maria Fookes, Fernanda Schreiber, Roy R Chaudhuri

PLoS One· October 2017

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Erratum: Distinct Salmonella Enteritidis lineages associated with enterocolitis in high-income settings and invasive disease in low-income settings.
Nicholas A Feasey, James Hadfield, Karen H Keddy, Timothy J Dallman, Jan Jacobs, Maria Fookes

Nat Genet· March 2017

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The secondary resistome of multidrug-resistant Klebsiella pneumoniae.
Bimal Jana, Amy K Cain, William T Doerrler, Christine J Boinett, Maria C Fookes

Sci Rep· February 2017

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The Type III Secretion System Effector SeoC of Salmonella enterica subsp. salamae and S. enterica subsp. arizonae ADP-Ribosylates Src and Inhibits Opsonophagocytosis.
Dominic J Pollard, Joanna C Young, Valentina Covarelli, Silvia Herrera-León, Thomas R Connor, Maria Fookes

Infect Immun· December 2016

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Distinct Salmonella Enteritidis lineages associated with enterocolitis in high-income settings and invasive disease in low-income settings.
Nicholas A Feasey, James Hadfield, Karen H Keddy, Timothy J Dallman, Jan Jacobs, Maria Fookes

Nat Genet· October 2016

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Travel- and Community-Based Transmission of Multidrug-Resistant Shigella sonnei Lineage among International Orthodox Jewish Communities.
Kate S Baker, Timothy J Dallman, Adi Behar, François-Xavier Weill, Malika Gouali, Maria Fookes

Emerg Infect Dis· September 2016

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Salmonella Enteritidis Isolate Harboring Multiple Efflux Pumps and Pathogenicity Factors, Shows Absence of O Antigen Polymerase Gene.
Daniela Jones-Dias, Lurdes Clemente, Conceição Egas, Hugo Froufe, Daniel A Sampaio, Maria Fookes

Front Microbiol· August 2016

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What's in a Name? Species-Wide Whole-Genome Sequencing Resolves Invasive and Noninvasive Lineages of Salmonella enterica Serotype Paratyphi B.
Thomas R Connor, Sian V Owen, Gemma Langridge, Steve Connell, Satheesh Nair, Maria Fookes

mBio· August 2016

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Correction: Elucidation of the RamA Regulon in Klebsiella pneumoniae Reveals a Role in LPS Regulation.
Shyamasree De Majumdar, Jing Yu, Maria Fookes, Sean P McAteer, Enrique Llobet

PLoS Pathog· May 2016

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Roary: rapid large-scale prokaryote pan genome analysis.
Andrew J Page, Carla A Cummins, Martin Hunt, Vanessa K Wong, Sandra Reuter, Maria Fookes

Bioinformatics· November 2015

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Whole genome analysis to detect potential vaccine-induced changes on Shigella sonnei genome.
Adi Behar, Maria C Fookes, Sophy Goren, Nicholas R Thomson, Dani Cohen

Vaccine· June 2015

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Patterns of genome evolution that have accompanied host adaptation in Salmonella.
Gemma C Langridge, Maria Fookes, Thomas R Connor, Theresa Feltwell, Nicholas Feasey

Proc Natl Acad Sci U S A· January 2015

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Elucidation of the RamA regulon in Klebsiella pneumoniae reveals a role in LPS regulation.
Shyamasree De Majumdar, Jing Yu, Maria Fookes, Sean P McAteer, Enrique Llobet

PLoS Pathog· January 2015

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RNA-seq analysis of the influence of anaerobiosis and FNR on Shigella flexneri.
Marta Vergara-Irigaray, Maria C Fookes, Nicholas R Thomson, Christoph M Tang

BMC Genomics· June 2014

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Parallel independent evolution of pathogenicity within the genus Yersinia.
Sandra Reuter, Thomas R Connor, Lars Barquist, Danielle Walker, Theresa Feltwell, Maria Fookes

Proc Natl Acad Sci U S A· May 2014

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Genomic characterisation of invasive non-typhoidal Salmonella enterica Subspecies enterica Serovar Bovismorbificans isolates from Malawi.
Christina Bronowski, Maria C Fookes, Ruth Gilderthorp, Kevin E Ashelford, Simon R Harris

PLoS Negl Trop Dis· November 2013

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