Publications by authors named "Marina Pak"

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MutAnt: mutation annotation tool predicts deleteriousness of missense mutations and improves mutation calling from transcriptomics.
Aleksandr Sarachakov, Anastasiya Yudina, Viktor Svekolkin, Anna Parfenenkova, Miryam Spektor, Marina Pak

Hum Genet· December 2025

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KRASAVA-An Expert System for Virtual Screening of KRAS G12D Inhibitors.
Oleg V Tinkov, Pavel E Gurevich, Sergei A Nikolenko, Shamil D Kadyrov, Natalya S Bogatyreva, Marina A Pak

Int J Mol Sci· December 2025

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MULAN: multimodal protein language model for sequence and structure encoding.
Daria Frolova, Marina Pak, Anna Litvin, Ilya Sharov, Dmitry Ivankov

Bioinform Adv· September 2025

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From barriers to participation: co-creating an effective reminder letter for breast cancer screening among underserved women in Flanders.
Allegra Ferrari, Liesbet Van Bos, Sarah Talboom, Wessel van de Veerdonk, Wendy D'haenens, Marina Pak

Arch Public Health· May 2025

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Design of stable circular permutants of the GroEL chaperone apical domain.
Tatiana N Melnik, Maria A Majorina, Daria E Vorobeva, Galina S Nagibina, Victoria R Veselova, Marina A Pak

Cell Commun Signal· February 2024

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Comparative Evaluation of the Antibacterial and Antitumor Activities of 9-Phenylfascaplysin and Its Analogs.
Maxim E Zhidkov, Maria A Sidorova, Polina A Smirnova, Oleg A Tryapkin, Andrey V Kachanov, Marina A Pak

Mar Drugs· January 2024

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Simulations Reveal Molecular Mechanism of Uranyl Ion Toxicity towards DNA-Binding Domain of PARP-1 Protein.
Egor S Bulavko, Marina A Pak, Dmitry N Ivankov

Biomolecules· August 2023

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Using AlphaFold to predict the impact of single mutations on protein stability and function.
Marina A Pak, Karina A Markhieva, Mariia S Novikova, Dmitry S Petrov, Ilya S Vorobyev

PLoS One· March 2023

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Best templates outperform homology models in predicting the impact of mutations on protein stability.
Marina A Pak, Dmitry N Ivankov

Bioinformatics· September 2022

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