Publications by authors named "Mark D Stares"

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Two microbiota subtypes identified in irritable bowel syndrome with distinct responses to the low FODMAP diet.
Kevin Vervier, Stephen Moss, Nitin Kumar, Anne Adoum, Meg Barne, Hilary Browne, Arthur Kaser, Christopher J Kiely, B Anne Neville, Nina Powell

September 2022

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Primary succession of Bifidobacteria drives pathogen resistance in neonatal microbiota assembly.
Yan Shao, Cristina Garcia-Mauriño, Simon Clare, Nicholas J R Dawson, Andre Mu, Mark D Stares

Nat Microbiol· October 2024

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Screening for Clostridioides difficile colonization at admission to the hospital: a multi-centre study.
Monique J T Crobach, Bastian V H Hornung, Cees Verduin, Margreet C Vos, Joost Hopman, Mark D Stares

Clin Microbiol Infect· July 2023

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Identification of gut microbial species linked with disease variability in a widely used mouse model of colitis.
Samuel C Forster, Simon Clare, Benjamin S Beresford-Jones, Katherine Harcourt, George Notley, Mark D Stares

Nat Microbiol· April 2022

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Strain-level characterization of broad host range mobile genetic elements transferring antibiotic resistance from the human microbiome.
Samuel C Forster, Junyan Liu, Nitin Kumar, Emily L Gulliver, Jodee A Gould, Mark D Stares

Nat Commun· March 2022

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The Mouse Gastrointestinal Bacteria Catalogue enables translation between the mouse and human gut microbiotas via functional mapping.
Benjamin S Beresford-Jones, Samuel C Forster, Mark D Stares, George Notley, Elisa Viciani

Cell Host Microbe· January 2022

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Distinct microbial and immune niches of the human colon.
Kylie R James, Tomas Gomes, Rasa Elmentaite, Nitin Kumar, Emily L Gulliver, Mark D Stares

Nat Immunol· March 2020

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Stunted microbiota and opportunistic pathogen colonization in caesarean-section birth.
Yan Shao, Samuel C Forster, Evdokia Tsaliki, Kevin Vervier, Angela Strang, Mark D Stares

Nature· October 2019

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Adaptation of host transmission cycle during Clostridium difficile speciation.
Nitin Kumar, Hilary P Browne, Elisa Viciani, Samuel C Forster, Simon Clare, Mark D Stares

Nat Genet· September 2019

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A human gut bacterial genome and culture collection for improved metagenomic analyses.
Samuel C Forster, Nitin Kumar, Blessing O Anonye, Alexandre Almeida, Elisa Viciani, Mark D Stares

Nat Biotechnol· February 2019

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Culturing of female bladder bacteria reveals an interconnected urogenital microbiota.
Krystal Thomas-White, Samuel C Forster, Nitin Kumar, Michelle Van Kuiken, Catherine Putonti, Mark D Stares

Nat Commun· April 2018

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Culturing of 'unculturable' human microbiota reveals novel taxa and extensive sporulation.
Hilary P Browne, Samuel C Forster, Blessing O Anonye, Nitin Kumar, B Anne Neville, Mark D Stares

Nature· May 2016

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Epithelial IL-22RA1-mediated fucosylation promotes intestinal colonization resistance to an opportunistic pathogen.
Tu Anh N Pham, Simon Clare, David Goulding, Julia M Arasteh, Mark D Stares

Cell Host Microbe· October 2014

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Survey of culture, goldengate assay, universal biosensor assay, and 16S rRNA Gene sequencing as alternative methods of bacterial pathogen detection.
Brianna Lindsay, Mihai Pop, Martin Antonio, Alan W Walker, Volker Mai, Mark D Stares

J Clin Microbiol· October 2013

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Targeted restoration of the intestinal microbiota with a simple, defined bacteriotherapy resolves relapsing Clostridium difficile disease in mice.
Trevor D Lawley, Simon Clare, Alan W Walker, Mark D Stares, Thomas R Connor

PLoS Pathog· April 2013

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Dominant and diet-responsive groups of bacteria within the human colonic microbiota.
Alan W Walker, Jennifer Ince, Sylvia H Duncan, Lucy M Webster, Grietje Holtrop, Mark D Stares

ISME J· February 2011

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