Publications by authors named "Mark Grimes"

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Protocol for generating human craniofacial cartilage organoids from stem-cell-derived neural crest cells.
Nagashree Avabhrath, Lauren Foltz, Mark Grimes

STAR Protoc· March 2025

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Decoupling Protein Concentration and Aggregate Content Using Diffusion and Water NMR.
Mark I Grimes, Matthew Cheeks, Jennifer Smith, Fabio Zurlo, Mick D Mantle

Anal Chem· July 2024

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Craniofacial chondrogenesis in organoids from human stem cell-derived neural crest cells.
Lauren Foltz, Nagashree Avabhrath, Jean-Marc Lanchy, Tyler Levy, Anthony Possemato, Mark Grimes

iScience· April 2024

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Network models of protein phosphorylation, acetylation, and ubiquitination connect metabolic and cell signaling pathways in lung cancer.
Karen E Ross, Guolin Zhang, Cuneyt Akcora, Yu Lin, Bin Fang, Mark Grimes

PLoS Comput Biol· March 2023

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Proteomics analysis identifies PEA-15 as an endosomal phosphoprotein that regulates α5β1 integrin endocytosis.
Maisel J Caliva, Won Seok Yang, Shirley Young-Robbins, Ming Zhou, Hana Yoon, Mark L Grimes

Sci Rep· October 2021

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An Alkyne-Metathesis-Based Approach to the Synthesis of the Anti-Malarial Macrodiolide Samroiyotmycin A.
Ektoras Yiannakas, Mark I Grimes, James T Whitelegge, Alois Fürstner, Alison N Hulme

Angew Chem Int Ed Engl· August 2021

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PAG1 directs SRC-family kinase intracellular localization to mediate receptor tyrosine kinase-induced differentiation.
Lauren Foltz, Juan Palacios-Moreno, Makenzie Mayfield, Shelby Kinch, Jordan Dillon, Mark Grimes

Mol Biol Cell· September 2020

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Integration of protein phosphorylation, acetylation, and methylation data sets to outline lung cancer signaling networks.
Mark Grimes, Benjamin Hall, Lauren Foltz, Tyler Levy, Klarisa Rikova

Sci Signal· May 2018

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Clustergrammer, a web-based heatmap visualization and analysis tool for high-dimensional biological data.
Nicolas F Fernandez, Gregory W Gundersen, Adeeb Rahman, Mark L Grimes, Klarisa Rikova

Sci Data· October 2017

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Neuroblastoma tyrosine kinase signaling networks involve FYN and LYN in endosomes and lipid rafts.
Juan Palacios-Moreno, Lauren Foltz, Ailan Guo, Matthew P Stokes, Emily D Kuehn, Mark L Grimes

PLoS Comput Biol· April 2015

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SH3 interactome conserves general function over specific form.
Xiaofeng Xin, David Gfeller, Jackie Cheng, Raffi Tonikian, Lin Sun, Mark L Grimes

Mol Syst Biol· September 2013

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Wrangling phosphoproteomic data to elucidate cancer signaling pathways.
Mark L Grimes, Wan-Jui Lee, Laurens van der Maaten, Paul Shannon

PLoS One· August 2013

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RCytoscape: tools for exploratory network analysis.
Paul T Shannon, Mark Grimes, Burak Kutlu, Jan J Bot, David J Galas

BMC Bioinformatics· July 2013

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NGF causes TrkA to specifically attract microtubules to lipid rafts.
Shona Pryor, Gretchen McCaffrey, Lindsay R Young, Mark L Grimes

PLoS One· August 2012

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Assembly of arenavirus envelope glycoprotein GPC in detergent-soluble membrane microdomains.
Sudhakar S Agnihothram, Brooke Dancho, Kenneth W Grant, Mark L Grimes, Douglas S Lyles

J Virol· October 2009

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High-resolution fractionation of signaling endosomes containing different receptors.
Gretchen McCaffrey, Jonathan Welker, Jessica Scott, Louise van der Salm, Mark L Grimes

Traffic· July 2009

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APPL1 associates with TrkA and GIPC1 and is required for nerve growth factor-mediated signal transduction.
Dan C Lin, Celia Quevedo, Natalie E Brewer, Alex Bell, Joseph R Testa, Mark L Grimes

Mol Cell Biol· December 2006

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Distinct signalling particles containing ERK/MEK and B-Raf in PC12 cells.
Matt MacCormick, Tanja Moderscheim, Louise W M van der Salm, Anna Moore, Shona Clements Pryor, Mark L Grimes

Biochem J· April 2005

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Receptor tyrosine kinase and G-protein coupled receptor signaling and sorting within endosomes.
Mark L Grimes, Heini M Miettinen

J Neurochem· March 2003

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