Publications by authors named "Mark Karavis"

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A novel approach to interrogating the effects of chemical warfare agent exposure using organ-on-a-chip technology and multiomic analysis.
Tyler D P Goralski, Conor C Jenkins, Daniel J Angelini, Jennifer R Horsmon, Elizabeth S Dhummakupt, Mark A Karavis

PLoS One· February 2023

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A Rapid, Whole Genome Sequencing Assay for Detection and Characterization of Novel Coronavirus (SARS-CoV-2) Clinical Specimens Using Nanopore Sequencing.
Maria T Arévalo, Mark A Karavis, Sarah E Katoski, Jacquelyn V Harris, Jessica M Hill

Front Microbiol· June 2022

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Draft Whole-Genome Sequences of Ciprofloxacin-Resistant Derivatives of a Bacillus anthracis ΔANR Strain Lacking pXO1 and pXO2 Plasmids.
Tracey D Biggs, Mark A Karavis, Jacquelyn V Harris, Jessica M Hill, Robert C Bernhards

Microbiol Resour Announc· April 2020

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The Essential Role of Hypermutation in Rapid Adaptation to Antibiotic Stress.
Heer H Mehta, Amy G Prater, Kathryn Beabout, Ryan A L Elworth, Mark Karavis

Antimicrob Agents Chemother· July 2019

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Use of Unamplified RNA/cDNA-Hybrid Nanopore Sequencing for Rapid Detection and Characterization of RNA Viruses.
Andy Kilianski, Pierce A Roth, Alvin T Liem, Jessica M Hill, Kristen L Willis, Mark A Karavis

Emerg Infect Dis· August 2016

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Pangenome Analysis of Burkholderia pseudomallei: Genome Evolution Preserves Gene Order despite High Recombination Rates.
Senanu M Spring-Pearson, Joshua K Stone, Adina Doyle, Christopher J Allender, Richard T Okinaka, Mark A Karavis

PLoS One· June 2016

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Whole-Genome Sequencing in Microbial Forensic Analysis of Gamma-Irradiated Microbial Materials.
Stacey M Broomall, Mohamed Ait Ichou, Michael D Krepps, Lauren A Johnsky, Mark A Karavis

Appl Environ Microbiol· January 2016

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Genomic sequences of six botulinum neurotoxin-producing strains representing three clostridial species illustrate the mobility and diversity of botulinum neurotoxin genes.
Theresa J Smith, Karen K Hill, Gary Xie, Brian T Foley, Charles H D Williamson, Mark A Karavis

Infect Genet Evol· March 2015

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Pathoadaptive mutations in Salmonella enterica isolated after serial passage in mice.
Sanna Koskiniemi, Henry S Gibbons, Linus Sandegren, Naeem Anwar, Gary Ouellette, Mark Karavis

PLoS One· March 2014

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A strain of Yersinia pestis with a mutator phenotype from the Republic of Georgia.
Chythanya Rajanna, Gary Ouellette, Mohammed Rashid, Adam Zemla, Mark Karavis

FEMS Microbiol Lett· June 2013

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Detection of Burkholderia pseudomallei O-antigen serotypes in near-neighbor species.
Joshua K Stone, Mark Mayo, Stephanie A Grasso, Jennifer L Ginther, Stephanie D Warrington, Mark A Karavis

BMC Microbiol· November 2012

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Comparative genomics of 2009 seasonal plague (Yersinia pestis) in New Mexico.
Henry S Gibbons, Michael D Krepps, Gary Ouellette, Mark Karavis, Lisa Onischuk

PLoS One· August 2012

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Genomic signatures of strain selection and enhancement in Bacillus atrophaeus var. globigii, a historical biowarfare simulant.
Henry S Gibbons, Stacey M Broomall, Lauren A McNew, Hajnalka Daligault, Carol Chapman, Mark Karavis

PLoS One· March 2011

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