Publications by authors named "Markus Kollmann"

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Congestion assessment using a self-supervised contrastive learning-derived risk index in patients with congestive heart failure (CONAN): protocol and design of a prospective cohort study.
Bojan Hartmann, Niels-Ulrik Hartmann, Julia Brandts, Marlo Verket, Nikolaus Marx, Markus Kollmann

Eur Heart J Digit Health· September 2025

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Self-sustained rhythmic behavior of sp. PCC 6803 under continuous light conditions in the absence of light-dark entrainment.
Lutz Claus Berwanger, Nikolaus Thumm, Florian Pascal Stirba, Rahil Gholamipoorfard, Alice Pawlowski, Markus Kollmann

PNAS Nexus· May 2025

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RNA-Puzzles Round V: blind predictions of 23 RNA structures.
Fan Bu, Yagoub Adam, Ryszard W Adamiak, Maciej Antczak, Belisa Rebeca H de Aquino, Markus Kollmann

Nat Methods· February 2025

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De novo prediction of RNA 3D structures with deep generative models.
Julius Ramakers, Christopher Frederik Blum, Sabrina König, Stefan Harmeling, Markus Kollmann

PLoS One· February 2024

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Wearable based monitoring and self-supervised contrastive learning detect clinical complications during treatment of Hematologic malignancies.
Malte Jacobsen, Rahil Gholamipoor, Till A Dembek, Pauline Rottmann, Marlo Verket, Markus Kollmann

NPJ Digit Med· June 2023

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Feasibility of Wearable-Based Remote Monitoring in Patients During Intensive Treatment for Aggressive Hematologic Malignancies.
Malte Jacobsen, Pauline Rottmann, Till A Dembek, Anna L Gerke, Rahil Gholamipoor, Markus Kollmann

JCO Clin Cancer Inform· January 2022

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Information integration and decision making in flowering time control.
Linlin Zhao, Sarah Richards, Franziska Turck, Markus Kollmann

PLoS One· November 2020

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Reliable Detection of Atrial Fibrillation with a Medical Wearable during Inpatient Conditions.
Malte Jacobsen, Till A Dembek, Athanasios-Panagiotis Ziakos, Rahil Gholamipoor, Guido Kobbe, Markus Kollmann

Sensors (Basel)· September 2020

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OutCyte: a novel tool for predicting unconventional protein secretion.
Linlin Zhao, Gereon Poschmann, Daniel Waldera-Lupa, Nima Rafiee, Markus Kollmann

Sci Rep· December 2019

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Neural networks with circular filters enable data efficient inference of sequence motifs.
Christopher F Blum, Markus Kollmann

Bioinformatics· October 2019

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Pharmacosimulation of interruptions and its solution in intravenous administration of cangrelor.
Maryna Masyuk, Nadia Heramvand, Johanna M Muessig, Amir M Nia, Amin Polzin, Markus Kollmann

Clin Hemorheol Microcirc· June 2018

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Automated computer-based detection of encounter behaviours in groups of honeybees.
Christina Blut, Alessandro Crespi, Danielle Mersch, Laurent Keller, Linlin Zhao, Markus Kollmann

Sci Rep· December 2017

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Perception and regulatory principles of microbial growth control.
Armin S Khonsari, Markus Kollmann

PLoS One· April 2016

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Resource constrained flux balance analysis predicts selective pressure on the global structure of metabolic networks.
Nima Abedpour, Markus Kollmann

BMC Syst Biol· November 2015

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Exponential signaling gain at the receptor level enhances signal-to-noise ratio in bacterial chemotaxis.
Silke Neumann, Linda Løvdok, Kajetan Bentele, Johannes Meisig, Ekkehard Ullner, Markus Kollmann

PLoS One· January 2015

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Robust signal processing in living cells.
Ralf Steuer, Steffen Waldherr, Victor Sourjik, Markus Kollmann

PLoS Comput Biol· November 2011

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Thermal robustness of signaling in bacterial chemotaxis.
Olga Oleksiuk, Vladimir Jakovljevic, Nikita Vladimirov, Ricardo Carvalho, Eli Paster, Markus Kollmann

Cell· April 2011

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A sequestration feedback determines dynamics and temperature entrainment of the KaiABC circadian clock.
Christian Brettschneider, Rebecca J Rose, Stefanie Hertel, Ilka M Axmann, Albert J R Heck, Markus Kollmann

Mol Syst Biol· July 2010

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Signatures of gene expression noise in cellular systems.
Julia Rausenberger, Christian Fleck, Jens Timmer, Markus Kollmann

Prog Biophys Mol Biol· April 2010

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Role of translational coupling in robustness of bacterial chemotaxis pathway.
Linda Løvdok, Kajetan Bentele, Nikita Vladimirov, Anette Müller, Ferencz S Pop, Markus Kollmann

PLoS Biol· August 2009

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Quantifying origins of cell-to-cell variations in gene expression.
Julia Rausenberger, Markus Kollmann

Biophys J· November 2008

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Functioning and robustness of a bacterial circadian clock.
Sébastien Clodong, Ulf Dühring, Luiza Kronk, Annegret Wilde, Ilka Axmann, Markus Kollmann

Mol Syst Biol· May 2007

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Co-expression of signaling proteins improves robustness of the bacterial chemotaxis pathway.
Linda Løvdok, Markus Kollmann, Victor Sourjik

J Biotechnol· April 2007

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In silico biology: from simulation to understanding.
Markus Kollmann, Victor Sourjik

Curr Biol· February 2007

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Computational processing and error reduction strategies for standardized quantitative data in biological networks.
Marcel Schilling, Thomas Maiwald, Sebastian Bohl, Markus Kollmann, Clemens Kreutz

FEBS J· December 2005

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